Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 AC004987.2-201ENST00000395959 1148 ntBASIC14.32□□□□□ -0.12
HLA-DOBP13765 MIR1233-2-201ENST00000408138 82 ntBASIC14.32□□□□□ -0.12
HLA-DOBP13765 MIR1233-1-201ENST00000408722 82 ntBASIC14.32□□□□□ -0.12
HLA-DOBP13765 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HLA-DOBP13765 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DOBP13765 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 LINC00554-201ENST00000564841 3011 ntBASIC14.31□□□□□ -0.12
HLA-DOBP13765 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 AC105021.1-202ENST00000570572 669 ntBASIC14.31□□□□□ -0.12
HLA-DOBP13765 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DOBP13765 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DOBP13765 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 AC092127.1-201ENST00000567093 3455 ntBASIC14.3□□□□□ -0.12
HLA-DOBP13765 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DOBP13765 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DOBP13765 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms