Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLTAP09496 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLTAP09496 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLTAP09496 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.48■□□□□ 0.39
CLTAP09496 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLTAP09496 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 MIR648-201ENST00000385046 94 ntBASIC17.48■□□□□ 0.39
CLTAP09496 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.48■□□□□ 0.39
CLTAP09496 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CLTAP09496 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.48■□□□□ 0.39
CLTAP09496 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.48■□□□□ 0.39
CLTAP09496 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.48■□□□□ 0.39
CLTAP09496 SERBP1P3-201ENST00000459980 809 ntBASIC17.48■□□□□ 0.39
CLTAP09496 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.48■□□□□ 0.39
CLTAP09496 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.48■□□□□ 0.39
CLTAP09496 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.48■□□□□ 0.39
CLTAP09496 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.48■□□□□ 0.39
CLTAP09496 AP001282.1-201ENST00000531301 1499 ntBASIC17.48■□□□□ 0.39
CLTAP09496 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLTAP09496 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.48■□□□□ 0.39
CLTAP09496 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.48■□□□□ 0.39
CLTAP09496 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLTAP09496 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLTAP09496 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CLTAP09496 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.47■□□□□ 0.39
CLTAP09496 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.47■□□□□ 0.39
CLTAP09496 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.47■□□□□ 0.39
CLTAP09496 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.47■□□□□ 0.39
CLTAP09496 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.47■□□□□ 0.39
CLTAP09496 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CLTAP09496 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLTAP09496 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CLTAP09496 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLTAP09496 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CLTAP09496 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.46■□□□□ 0.39
CLTAP09496 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLTAP09496 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 FAM8A3P-201ENST00000427218 844 ntBASIC17.46■□□□□ 0.39
CLTAP09496 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.46■□□□□ 0.39
CLTAP09496 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms