Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQB2P05538 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-DQB2P05538 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-DQB2P05538 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
HLA-DQB2P05538 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 MIR943-201ENST00000401286 94 ntBASIC16.14■□□□□ 0.17
HLA-DQB2P05538 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 AL645939.2-201ENST00000427340 991 ntBASIC16.14■□□□□ 0.17
HLA-DQB2P05538 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 AC097493.3-201ENST00000509725 367 ntBASIC16.14■□□□□ 0.17
HLA-DQB2P05538 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 AC027369.6-201ENST00000525520 931 ntBASIC16.14■□□□□ 0.17
HLA-DQB2P05538 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 AL158211.3-201ENST00000607385 239 ntBASIC16.14■□□□□ 0.17
HLA-DQB2P05538 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 AL033527.5-202ENST00000641632 1098 ntBASIC16.14■□□□□ 0.17
HLA-DQB2P05538 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB2P05538 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.13■□□□□ 0.17
HLA-DQB2P05538 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AL162727.3-201ENST00000635661 2787 ntBASIC16.13■□□□□ 0.17
HLA-DQB2P05538 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AC093512.1-201ENST00000617969 520 ntBASIC16.13■□□□□ 0.17
HLA-DQB2P05538 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB2P05538 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 AC009090.5-201ENST00000624886 2285 ntBASIC16.12■□□□□ 0.17
HLA-DQB2P05538 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB2P05538 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms