Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NKX2-2O95096 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
NKX2-2O95096 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NKX2-2O95096 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX2-2O95096 KRT18P28-201ENST00000453838 1332 ntBASIC14.68□□□□□ -0.06
NKX2-2O95096 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX2-2O95096 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX2-2O95096 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.68□□□□□ -0.06
NKX2-2O95096 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.68□□□□□ -0.06
NKX2-2O95096 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.68□□□□□ -0.06
NKX2-2O95096 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.68□□□□□ -0.06
NKX2-2O95096 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.68□□□□□ -0.06
NKX2-2O95096 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.68□□□□□ -0.06
NKX2-2O95096 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.68□□□□□ -0.06
NKX2-2O95096 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.68□□□□□ -0.06
NKX2-2O95096 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX2-2O95096 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
NKX2-2O95096 AL138828.2-201ENST00000615812 383 ntBASIC14.68□□□□□ -0.06
NKX2-2O95096 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.68□□□□□ -0.06
NKX2-2O95096 AC073592.8-201ENST00000624126 511 ntBASIC14.68□□□□□ -0.06
NKX2-2O95096 AL033527.5-202ENST00000641632 1098 ntBASIC14.68□□□□□ -0.06
NKX2-2O95096 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 TMBIM7P-203ENST00000641617 1718 ntBASIC14.68□□□□□ -0.06
NKX2-2O95096 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NKX2-2O95096 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.68□□□□□ -0.06
NKX2-2O95096 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX2-2O95096 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
NKX2-2O95096 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 SSR4P1-203ENST00000599569 2260 ntBASIC14.68□□□□□ -0.06
NKX2-2O95096 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX2-2O95096 AC090616.6-203ENST00000579186 1945 ntBASIC14.68□□□□□ -0.06
NKX2-2O95096 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-2O95096 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.67□□□□□ -0.06
NKX2-2O95096 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-2O95096 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
NKX2-2O95096 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.67□□□□□ -0.06
NKX2-2O95096 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-2O95096 AC107890.1-201ENST00000422478 521 ntBASIC14.67□□□□□ -0.06
NKX2-2O95096 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 METTL21AP1-201ENST00000438852 635 ntBASIC14.67□□□□□ -0.06
NKX2-2O95096 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.67□□□□□ -0.06
NKX2-2O95096 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 AC069120.2-201ENST00000524091 540 ntBASIC14.67□□□□□ -0.06
NKX2-2O95096 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-2O95096 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-2O95096 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-2O95096 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.67□□□□□ -0.06
NKX2-2O95096 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.67□□□□□ -0.06
NKX2-2O95096 TEX28P1-201ENST00000613479 1221 ntBASIC14.67□□□□□ -0.06
NKX2-2O95096 TEX28P2-201ENST00000617764 1221 ntBASIC14.67□□□□□ -0.06
NKX2-2O95096 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-2O95096 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms