Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.71■□□□□ 0.27
SOX1O00570 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SOX1O00570 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
SOX1O00570 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.71■□□□□ 0.27
SOX1O00570 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SOX1O00570 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX1O00570 AC242376.2-201ENST00000619355 883 ntBASIC16.71■□□□□ 0.27
SOX1O00570 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.71■□□□□ 0.27
SOX1O00570 AP001002.3-201ENST00000623482 206 ntBASIC16.71■□□□□ 0.27
SOX1O00570 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 AL157791.1-201ENST00000553667 1699 ntBASIC16.71■□□□□ 0.27
SOX1O00570 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SOX1O00570 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SOX1O00570 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.71■□□□□ 0.26
SOX1O00570 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SOX1O00570 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SOX1O00570 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 AL133267.1-201ENST00000398220 340 ntBASIC16.7■□□□□ 0.26
SOX1O00570 AL354877.1-201ENST00000424412 413 ntBASIC16.7■□□□□ 0.26
SOX1O00570 ISCA2P1-201ENST00000425548 448 ntBASIC16.7■□□□□ 0.26
SOX1O00570 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.7■□□□□ 0.26
SOX1O00570 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.7■□□□□ 0.26
SOX1O00570 AC104073.2-201ENST00000453737 312 ntBASIC16.7■□□□□ 0.26
SOX1O00570 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.7■□□□□ 0.26
SOX1O00570 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 RN7SL48P-201ENST00000579283 293 ntBASIC16.7■□□□□ 0.26
SOX1O00570 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.7■□□□□ 0.26
SOX1O00570 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.7■□□□□ 0.26
SOX1O00570 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.7■□□□□ 0.26
SOX1O00570 AC018695.6-201ENST00000614011 534 ntBASIC16.7■□□□□ 0.26
SOX1O00570 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SOX1O00570 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.7■□□□□ 0.26
SOX1O00570 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX1O00570 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX1O00570 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SOX1O00570 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.69■□□□□ 0.26
SOX1O00570 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 KRT8P29-201ENST00000420409 1371 ntBASIC16.69■□□□□ 0.26
SOX1O00570 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.69■□□□□ 0.26
SOX1O00570 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX1O00570 AC079112.1-201ENST00000454972 939 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms