Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-DRB4X5D2U9 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
HLA-DRB4X5D2U9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HLA-DRB4X5D2U9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.1□□□□□ -0.47
HLA-DRB4X5D2U9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-DRB4X5D2U9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
HLA-DRB4X5D2U9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-DRB4X5D2U9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-DRB4X5D2U9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 TIMM8BP1-201ENST00000452384 211 ntBASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 AC098859.1-201ENST00000502915 1238 ntBASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 IGHV3-62-201ENST00000520057 340 ntBASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 KRT8P23-201ENST00000560090 1207 ntBASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 AC027307.2-201ENST00000591252 911 ntBASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HLA-DRB4X5D2U9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.08□□□□□ -0.47
HLA-DRB4X5D2U9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
HLA-DRB4X5D2U9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
HLA-DRB4X5D2U9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.08□□□□□ -0.47
HLA-DRB4X5D2U9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
HLA-DRB4X5D2U9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.08□□□□□ -0.47
HLA-DRB4X5D2U9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
HLA-DRB4X5D2U9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms