Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 FAM8A3P-201ENST00000427218 844 ntBASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 AC092337.1-201ENST00000568699 1129 ntBASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TMEM248Q9NWD8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 SPDYE18-201ENST00000510091 1050 ntBASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 SLED1-202ENST00000512051 380 ntBASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TMEM248Q9NWD8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 TSPY16P-201ENST00000449843 468 ntBASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 AC009118.2-201ENST00000613275 655 ntBASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 AF228730.6-201ENST00000641497 218 ntBASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 AC084121.3-201ENST00000641716 218 ntBASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM248Q9NWD8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms