Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 AC087499.5-201ENST00000452760 1342 ntBASIC13.25□□□□□ -0.29
GAFA1Q96PS6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 AC136604.1-201ENST00000418535 575 ntBASIC13.25□□□□□ -0.29
GAFA1Q96PS6 AC241585.1-201ENST00000433527 519 ntBASIC13.25□□□□□ -0.29
GAFA1Q96PS6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 AC005498.2-205ENST00000593218 784 ntBASIC13.25□□□□□ -0.29
GAFA1Q96PS6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 AL844908.2-201ENST00000609461 460 ntBASIC13.25□□□□□ -0.29
GAFA1Q96PS6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.25□□□□□ -0.29
GAFA1Q96PS6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GAFA1Q96PS6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 TSSK5P-201ENST00000423978 907 ntBASIC13.24□□□□□ -0.29
GAFA1Q96PS6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 AL607033.1-201ENST00000623900 1599 ntBASIC13.24□□□□□ -0.29
GAFA1Q96PS6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms