Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L1Q8WWY6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 BX640514.1-201ENST00000583223 1918 ntBASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 AC010327.5-201ENST00000586923 3061 ntBASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 ABCD1P5-201ENST00000445663 754 ntBASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 SLC25A6P2-201ENST00000497974 877 ntBASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 AC145285.6-201ENST00000604632 637 ntBASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L1Q8WWY6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L1Q8WWY6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms