Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSMEM1Q8WWF3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 AL139011.1-202ENST00000642063 584 ntBASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SSMEM1Q8WWF3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSMEM1Q8WWF3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms