Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 AP001269.4-201ENST00000609611 512 ntBASIC14.03□□□□□ -0.16
C11orf88Q6PI97 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.03□□□□□ -0.16
C11orf88Q6PI97 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.03□□□□□ -0.16
C11orf88Q6PI97 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C11orf88Q6PI97 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 MIR193BHG-211ENST00000641433 5365 ntBASIC14.02□□□□□ -0.16
C11orf88Q6PI97 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
C11orf88Q6PI97 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms