Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.71■□□□□ 0.27
IRX4P78413 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
IRX4P78413 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX4P78413 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX4P78413 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 AC092580.3-201ENST00000430932 139 ntBASIC16.71■□□□□ 0.27
IRX4P78413 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX4P78413 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.71■□□□□ 0.27
IRX4P78413 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.71■□□□□ 0.27
IRX4P78413 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.71■□□□□ 0.27
IRX4P78413 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX4P78413 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.71■□□□□ 0.27
IRX4P78413 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 AL359881.2-201ENST00000602973 570 ntBASIC16.71■□□□□ 0.27
IRX4P78413 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 AC025048.6-201ENST00000634326 1161 ntBASIC16.71■□□□□ 0.27
IRX4P78413 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX4P78413 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
IRX4P78413 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.71■□□□□ 0.27
IRX4P78413 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX4P78413 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
IRX4P78413 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IRX4P78413 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.71■□□□□ 0.27
IRX4P78413 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IRX4P78413 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
IRX4P78413 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.7■□□□□ 0.26
IRX4P78413 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX4P78413 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX4P78413 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
IRX4P78413 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IRX4P78413 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX4P78413 NME2P1-201ENST00000426182 414 ntBASIC16.7■□□□□ 0.26
IRX4P78413 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.7■□□□□ 0.26
IRX4P78413 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
IRX4P78413 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX4P78413 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.7■□□□□ 0.26
IRX4P78413 ALG1L8P-201ENST00000533887 760 ntBASIC16.7■□□□□ 0.26
IRX4P78413 AL596325.1-201ENST00000563991 1082 ntBASIC16.7■□□□□ 0.26
IRX4P78413 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
IRX4P78413 AL662799.1-202ENST00000614205 422 ntBASIC16.7■□□□□ 0.26
IRX4P78413 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IRX4P78413 AL671710.1-201ENST00000610245 2349 ntBASIC16.7■□□□□ 0.26
IRX4P78413 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
IRX4P78413 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.7■□□□□ 0.26
IRX4P78413 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IRX4P78413 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
IRX4P78413 KRT8P49-201ENST00000604166 1432 ntBASIC16.7■□□□□ 0.26
IRX4P78413 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
IRX4P78413 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
IRX4P78413 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.69■□□□□ 0.26
IRX4P78413 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.69■□□□□ 0.26
IRX4P78413 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.69■□□□□ 0.26
IRX4P78413 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.69■□□□□ 0.26
IRX4P78413 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IRX4P78413 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms