Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNA1P78396 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNA1P78396 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
CCNA1P78396 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNA1P78396 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.02■□□□□ 0.48
CCNA1P78396 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNA1P78396 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNA1P78396 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNA1P78396 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCNA1P78396 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNA1P78396 MSTO2P-201ENST00000314835 1709 ntBASIC18.02■□□□□ 0.48
CCNA1P78396 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
CCNA1P78396 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNA1P78396 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNA1P78396 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCNA1P78396 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNA1P78396 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.02■□□□□ 0.48
CCNA1P78396 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNA1P78396 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.02■□□□□ 0.48
CCNA1P78396 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.02■□□□□ 0.48
CCNA1P78396 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNA1P78396 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CCNA1P78396 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNA1P78396 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.02■□□□□ 0.48
CCNA1P78396 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.02■□□□□ 0.48
CCNA1P78396 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CCNA1P78396 AC008687.7-202ENST00000637404 953 ntBASIC18.02■□□□□ 0.48
CCNA1P78396 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.02■□□□□ 0.47
CCNA1P78396 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNA1P78396 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.02■□□□□ 0.47
CCNA1P78396 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNA1P78396 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.02■□□□□ 0.47
CCNA1P78396 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNA1P78396 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNA1P78396 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNA1P78396 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CCNA1P78396 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.02■□□□□ 0.47
CCNA1P78396 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNA1P78396 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.01■□□□□ 0.47
CCNA1P78396 AL607033.1-201ENST00000623900 1599 ntBASIC18.01■□□□□ 0.47
CCNA1P78396 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CCNA1P78396 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCNA1P78396 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCNA1P78396 AC023310.1-201ENST00000554836 735 ntBASIC18.01■□□□□ 0.47
CCNA1P78396 DUX4L45-201ENST00000566406 1057 ntBASIC18.01■□□□□ 0.47
CCNA1P78396 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNA1P78396 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.01■□□□□ 0.47
CCNA1P78396 AC097359.3-201ENST00000603982 1210 ntBASIC18.01■□□□□ 0.47
CCNA1P78396 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.01■□□□□ 0.47
CCNA1P78396 AC244669.2-201ENST00000612320 853 ntBASIC18.01■□□□□ 0.47
CCNA1P78396 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.01■□□□□ 0.47
CCNA1P78396 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNA1P78396 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCNA1P78396 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCNA1P78396 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNA1P78396 ME2P1-201ENST00000426028 1970 ntBASIC18■□□□□ 0.47
CCNA1P78396 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18■□□□□ 0.47
CCNA1P78396 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCNA1P78396 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18■□□□□ 0.47
CCNA1P78396 AC026954.1-201ENST00000429771 1293 ntBASIC18■□□□□ 0.47
CCNA1P78396 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18■□□□□ 0.47
CCNA1P78396 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18■□□□□ 0.47
CCNA1P78396 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CCNA1P78396 RN7SL560P-201ENST00000577943 264 ntBASIC18■□□□□ 0.47
CCNA1P78396 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18■□□□□ 0.47
CCNA1P78396 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18■□□□□ 0.47
CCNA1P78396 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCNA1P78396 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNA1P78396 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms