Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.28■□□□□ 0.36
SNRPFP62306 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.28■□□□□ 0.36
SNRPFP62306 AC009477.1-201ENST00000452936 217 ntBASIC17.28■□□□□ 0.36
SNRPFP62306 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.28■□□□□ 0.36
SNRPFP62306 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.28■□□□□ 0.36
SNRPFP62306 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.28■□□□□ 0.36
SNRPFP62306 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.28■□□□□ 0.36
SNRPFP62306 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.28■□□□□ 0.36
SNRPFP62306 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNRPFP62306 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.28■□□□□ 0.36
SNRPFP62306 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SNRPFP62306 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.28■□□□□ 0.36
SNRPFP62306 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNRPFP62306 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.28■□□□□ 0.36
SNRPFP62306 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.28■□□□□ 0.36
SNRPFP62306 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.28■□□□□ 0.36
SNRPFP62306 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.28■□□□□ 0.36
SNRPFP62306 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SNRPFP62306 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 AC074338.1-201ENST00000416825 156 ntBASIC17.27■□□□□ 0.36
SNRPFP62306 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.27■□□□□ 0.36
SNRPFP62306 RPL13P2-201ENST00000440687 659 ntBASIC17.27■□□□□ 0.36
SNRPFP62306 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.27■□□□□ 0.36
SNRPFP62306 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 SLED1-202ENST00000512051 380 ntBASIC17.27■□□□□ 0.36
SNRPFP62306 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.27■□□□□ 0.36
SNRPFP62306 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.27■□□□□ 0.36
SNRPFP62306 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.27■□□□□ 0.36
SNRPFP62306 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.27■□□□□ 0.36
SNRPFP62306 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.27■□□□□ 0.36
SNRPFP62306 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SNRPFP62306 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.27■□□□□ 0.36
SNRPFP62306 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNRPFP62306 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNRPFP62306 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.27■□□□□ 0.35
SNRPFP62306 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNRPFP62306 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.27■□□□□ 0.35
SNRPFP62306 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNRPFP62306 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.27■□□□□ 0.35
SNRPFP62306 TMBIM7P-203ENST00000641617 1718 ntBASIC17.27■□□□□ 0.35
SNRPFP62306 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNRPFP62306 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.27■□□□□ 0.35
SNRPFP62306 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.27■□□□□ 0.35
SNRPFP62306 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.26■□□□□ 0.35
SNRPFP62306 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SNRPFP62306 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.26■□□□□ 0.35
SNRPFP62306 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
SNRPFP62306 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 AC127383.1-201ENST00000444697 1800 ntBASIC17.26■□□□□ 0.35
SNRPFP62306 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.26■□□□□ 0.35
SNRPFP62306 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.26■□□□□ 0.35
SNRPFP62306 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.26■□□□□ 0.35
SNRPFP62306 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.26■□□□□ 0.35
SNRPFP62306 TOMM22P5-201ENST00000416399 439 ntBASIC17.26■□□□□ 0.35
SNRPFP62306 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.26■□□□□ 0.35
SNRPFP62306 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.26■□□□□ 0.35
SNRPFP62306 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.26■□□□□ 0.35
SNRPFP62306 IGHV3-42-201ENST00000520410 361 ntBASIC17.26■□□□□ 0.35
SNRPFP62306 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.26■□□□□ 0.35
SNRPFP62306 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.26■□□□□ 0.35
SNRPFP62306 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.26■□□□□ 0.35
SNRPFP62306 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.26■□□□□ 0.35
SNRPFP62306 AC093512.1-201ENST00000617969 520 ntBASIC17.26■□□□□ 0.35
SNRPFP62306 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.26■□□□□ 0.35
SNRPFP62306 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SNRPFP62306 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNRPFP62306 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms