Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 SNX33P1-201ENST00000592116 1762 ntBASIC18.3■□□□□ 0.52
CHMP4BP1P59074 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 AC135586.1-201ENST00000539323 574 ntBASIC18.3■□□□□ 0.52
CHMP4BP1P59074 SPDYE22P-201ENST00000582158 798 ntBASIC18.3■□□□□ 0.52
CHMP4BP1P59074 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 AL132655.2-201ENST00000596276 594 ntBASIC18.3■□□□□ 0.52
CHMP4BP1P59074 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP4BP1P59074 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 AC023824.1-201ENST00000562945 2975 ntBASIC18.29■□□□□ 0.52
CHMP4BP1P59074 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 KRT17P7-201ENST00000451704 1104 ntBASIC18.29■□□□□ 0.52
CHMP4BP1P59074 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 AC013467.2-201ENST00000605472 835 ntBASIC18.29■□□□□ 0.52
CHMP4BP1P59074 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP4BP1P59074 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 AC087499.5-201ENST00000452760 1342 ntBASIC18.28■□□□□ 0.52
CHMP4BP1P59074 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CHMP4BP1P59074 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms