Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 RPL13P2-201ENST00000440687 659 ntBASIC13.81□□□□□ -0.2
HCFC1P51610 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.81□□□□□ -0.2
HCFC1P51610 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HCFC1P51610 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.81□□□□□ -0.2
HCFC1P51610 AC243562.2-201ENST00000561247 970 ntBASIC13.81□□□□□ -0.2
HCFC1P51610 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HCFC1P51610 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
HCFC1P51610 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HCFC1P51610 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
HCFC1P51610 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HCFC1P51610 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
HCFC1P51610 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.81□□□□□ -0.2
HCFC1P51610 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HCFC1P51610 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
HCFC1P51610 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HCFC1P51610 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.81□□□□□ -0.2
HCFC1P51610 PFN1P12-201ENST00000455938 534 ntBASIC13.81□□□□□ -0.2
HCFC1P51610 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HCFC1P51610 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 AC022137.2-201ENST00000503482 481 ntBASIC13.81□□□□□ -0.2
HCFC1P51610 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
HCFC1P51610 KRT90P-201ENST00000549264 1064 ntBASIC13.81□□□□□ -0.2
HCFC1P51610 C2orf69P2-201ENST00000562032 1123 ntBASIC13.81□□□□□ -0.2
HCFC1P51610 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.81□□□□□ -0.2
HCFC1P51610 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HCFC1P51610 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 MSTO2P-201ENST00000314835 1709 ntBASIC13.8□□□□□ -0.2
HCFC1P51610 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HCFC1P51610 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HCFC1P51610 AC006033.1-201ENST00000440505 426 ntBASIC13.8□□□□□ -0.2
HCFC1P51610 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.8□□□□□ -0.2
HCFC1P51610 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.8□□□□□ -0.2
HCFC1P51610 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.8□□□□□ -0.2
HCFC1P51610 AC005252.2-201ENST00000624630 1141 ntBASIC13.8□□□□□ -0.2
HCFC1P51610 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.8□□□□□ -0.2
HCFC1P51610 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
HCFC1P51610 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.8□□□□□ -0.2
HCFC1P51610 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HCFC1P51610 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.8□□□□□ -0.2
HCFC1P51610 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms