Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GGTLC5P-201ENST00000617623 998 ntBASIC13.23□□□□□ -0.29
SNCAP37840 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.23□□□□□ -0.29
SNCAP37840 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.23□□□□□ -0.29
SNCAP37840 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.23□□□□□ -0.29
SNCAP37840 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.22□□□□□ -0.29
SNCAP37840 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.22□□□□□ -0.29
SNCAP37840 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 SNX33P1-201ENST00000592116 1762 ntBASIC13.22□□□□□ -0.29
SNCAP37840 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.22□□□□□ -0.29
SNCAP37840 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SNCAP37840 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 AL137784.3-201ENST00000623858 2288 ntBASIC13.22□□□□□ -0.29
SNCAP37840 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.22□□□□□ -0.29
SNCAP37840 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.22□□□□□ -0.29
SNCAP37840 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SNCAP37840 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.22□□□□□ -0.29
SNCAP37840 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.22□□□□□ -0.29
SNCAP37840 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.22□□□□□ -0.29
SNCAP37840 KRT18P31-201ENST00000506277 1292 ntBASIC13.22□□□□□ -0.29
SNCAP37840 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SNCAP37840 SART3-203ENST00000546611 1184 ntBASIC13.22□□□□□ -0.29
SNCAP37840 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.22□□□□□ -0.29
SNCAP37840 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.22□□□□□ -0.29
SNCAP37840 AC005412.3-201ENST00000580309 715 ntBASIC13.22□□□□□ -0.29
SNCAP37840 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.22□□□□□ -0.29
SNCAP37840 AC020765.3-201ENST00000613051 740 ntBASIC13.22□□□□□ -0.29
SNCAP37840 REXO1L3P-201ENST00000622202 1288 ntBASIC13.22□□□□□ -0.29
SNCAP37840 AL805961.1-202ENST00000641562 540 ntBASIC13.22□□□□□ -0.29
SNCAP37840 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SNCAP37840 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.22□□□□□ -0.29
SNCAP37840 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.22□□□□□ -0.29
SNCAP37840 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
SNCAP37840 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.22□□□□□ -0.29
SNCAP37840 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.22□□□□□ -0.29
SNCAP37840 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
SNCAP37840 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.22□□□□□ -0.29
SNCAP37840 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SNCAP37840 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SNCAP37840 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.21□□□□□ -0.29
SNCAP37840 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SNCAP37840 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.21□□□□□ -0.29
SNCAP37840 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 AC129492.6-201ENST00000611383 1305 ntBASIC13.21□□□□□ -0.29
SNCAP37840 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SNCAP37840 AC232323.1-201ENST00000540724 2099 ntBASIC13.21□□□□□ -0.29
SNCAP37840 REXO1L5P-201ENST00000622260 2098 ntBASIC13.21□□□□□ -0.29
SNCAP37840 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SNCAP37840 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.21□□□□□ -0.29
SNCAP37840 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.21□□□□□ -0.29
SNCAP37840 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.21□□□□□ -0.29
SNCAP37840 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.21□□□□□ -0.29
SNCAP37840 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.21□□□□□ -0.29
SNCAP37840 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms