Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.62□□□□□ -0.23
BCL3P20749 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.62□□□□□ -0.23
BCL3P20749 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.62□□□□□ -0.23
BCL3P20749 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.62□□□□□ -0.23
BCL3P20749 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.62□□□□□ -0.23
BCL3P20749 AC136621.1-201ENST00000624017 2304 ntBASIC13.62□□□□□ -0.23
BCL3P20749 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.62□□□□□ -0.23
BCL3P20749 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.62□□□□□ -0.23
BCL3P20749 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
BCL3P20749 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BCL3P20749 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
BCL3P20749 AC022532.1-201ENST00000624563 1728 ntBASIC13.61□□□□□ -0.23
BCL3P20749 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.61□□□□□ -0.23
BCL3P20749 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.61□□□□□ -0.23
BCL3P20749 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
BCL3P20749 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.61□□□□□ -0.23
BCL3P20749 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.61□□□□□ -0.23
BCL3P20749 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.61□□□□□ -0.23
BCL3P20749 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.61□□□□□ -0.23
BCL3P20749 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 PGAM5P1-201ENST00000518923 814 ntBASIC13.61□□□□□ -0.23
BCL3P20749 IGHV3-62-201ENST00000520057 340 ntBASIC13.61□□□□□ -0.23
BCL3P20749 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 AP000842.3-202ENST00000569238 1080 ntBASIC13.61□□□□□ -0.23
BCL3P20749 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.61□□□□□ -0.23
BCL3P20749 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.61□□□□□ -0.23
BCL3P20749 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
BCL3P20749 AL691432.1-201ENST00000596308 1422 ntBASIC13.61□□□□□ -0.23
BCL3P20749 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.61□□□□□ -0.23
BCL3P20749 SSR4P1-203ENST00000599569 2260 ntBASIC13.61□□□□□ -0.23
BCL3P20749 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.61□□□□□ -0.23
BCL3P20749 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 AC020658.6-201ENST00000623564 1870 ntBASIC13.61□□□□□ -0.23
BCL3P20749 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BCL3P20749 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BCL3P20749 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.61□□□□□ -0.23
BCL3P20749 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.6□□□□□ -0.23
BCL3P20749 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BCL3P20749 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BCL3P20749 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
BCL3P20749 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.6□□□□□ -0.23
BCL3P20749 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.6□□□□□ -0.23
BCL3P20749 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
BCL3P20749 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.6□□□□□ -0.23
BCL3P20749 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BCL3P20749 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BCL3P20749 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
BCL3P20749 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BCL3P20749 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BCL3P20749 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BCL3P20749 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms