Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
CHGBP05060 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.1■□□□□ 0.65
CHGBP05060 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 SPDYE19P-201ENST00000338590 713 ntBASIC19.1■□□□□ 0.65
CHGBP05060 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHGBP05060 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 AL035633.1-201ENST00000406139 838 ntBASIC19.1■□□□□ 0.65
CHGBP05060 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.1■□□□□ 0.65
CHGBP05060 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHGBP05060 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.1■□□□□ 0.65
CHGBP05060 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHGBP05060 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.1■□□□□ 0.65
CHGBP05060 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.1■□□□□ 0.65
CHGBP05060 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHGBP05060 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHGBP05060 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CHGBP05060 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CHGBP05060 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHGBP05060 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.09■□□□□ 0.65
CHGBP05060 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.09■□□□□ 0.65
CHGBP05060 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.09■□□□□ 0.65
CHGBP05060 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.09■□□□□ 0.65
CHGBP05060 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.09■□□□□ 0.65
CHGBP05060 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.09■□□□□ 0.65
CHGBP05060 CHCHD2P3-201ENST00000603038 451 ntBASIC19.09■□□□□ 0.65
CHGBP05060 AC074044.1-201ENST00000609673 707 ntBASIC19.09■□□□□ 0.65
CHGBP05060 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CHGBP05060 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CHGBP05060 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CHGBP05060 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.09■□□□□ 0.65
CHGBP05060 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.09■□□□□ 0.65
CHGBP05060 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHGBP05060 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.09■□□□□ 0.65
CHGBP05060 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.08■□□□□ 0.65
CHGBP05060 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHGBP05060 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHGBP05060 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHGBP05060 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHGBP05060 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHGBP05060 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHGBP05060 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHGBP05060 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.08■□□□□ 0.65
CHGBP05060 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHGBP05060 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.08■□□□□ 0.65
CHGBP05060 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHGBP05060 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHGBP05060 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CHGBP05060 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.08■□□□□ 0.64
CHGBP05060 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CHGBP05060 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.08■□□□□ 0.64
CHGBP05060 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.08■□□□□ 0.64
CHGBP05060 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.08■□□□□ 0.64
CHGBP05060 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHGBP05060 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.08■□□□□ 0.64
CHGBP05060 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHGBP05060 MIR8072-201ENST00000614241 80 ntBASIC19.08■□□□□ 0.64
CHGBP05060 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CHGBP05060 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHGBP05060 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHGBP05060 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHGBP05060 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.08■□□□□ 0.64
CHGBP05060 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHGBP05060 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.08■□□□□ 0.64
CHGBP05060 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHGBP05060 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CHGBP05060 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms