Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRGV3P03979 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.63□□□□□ -0.39
TRGV3P03979 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRGV3P03979 LINC00554-201ENST00000564841 3011 ntBASIC12.63□□□□□ -0.39
TRGV3P03979 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV3P03979 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TRGV3P03979 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRGV3P03979 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRGV3P03979 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV3P03979 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV3P03979 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.63□□□□□ -0.39
TRGV3P03979 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TRGV3P03979 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 AL596257.1-201ENST00000641463 2694 ntBASIC12.62□□□□□ -0.39
TRGV3P03979 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV3P03979 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV3P03979 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TRGV3P03979 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TRGV3P03979 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.62□□□□□ -0.39
TRGV3P03979 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV3P03979 AC109322.1-201ENST00000524499 1264 ntBASIC12.62□□□□□ -0.39
TRGV3P03979 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TRGV3P03979 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.62□□□□□ -0.39
TRGV3P03979 MIR4453-201ENST00000584019 89 ntBASIC12.62□□□□□ -0.39
TRGV3P03979 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV3P03979 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
TRGV3P03979 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
TRGV3P03979 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.62□□□□□ -0.39
TRGV3P03979 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRGV3P03979 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV3P03979 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV3P03979 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
TRGV3P03979 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
TRGV3P03979 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 AC007950.2-201ENST00000615045 2347 ntBASIC12.61□□□□□ -0.39
TRGV3P03979 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRGV3P03979 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
TRGV3P03979 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRGV3P03979 AL139400.1-201ENST00000366220 510 ntBASIC12.61□□□□□ -0.39
TRGV3P03979 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.61□□□□□ -0.39
TRGV3P03979 MTND6P24-201ENST00000440466 518 ntBASIC12.61□□□□□ -0.39
TRGV3P03979 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.61□□□□□ -0.39
TRGV3P03979 FAM86GP-201ENST00000448322 971 ntBASIC12.61□□□□□ -0.39
TRGV3P03979 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 AL139010.1-201ENST00000454878 894 ntBASIC12.61□□□□□ -0.39
TRGV3P03979 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV3P03979 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV3P03979 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms