Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA1P02708 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 DRD5P1-201ENST00000456605 1438 ntBASIC17.22■□□□□ 0.35
CHRNA1P02708 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.22■□□□□ 0.35
CHRNA1P02708 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CHRNA1P02708 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.22■□□□□ 0.35
CHRNA1P02708 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.22■□□□□ 0.35
CHRNA1P02708 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.22■□□□□ 0.35
CHRNA1P02708 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.22■□□□□ 0.35
CHRNA1P02708 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHRNA1P02708 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.22■□□□□ 0.35
CHRNA1P02708 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.22■□□□□ 0.35
CHRNA1P02708 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.22■□□□□ 0.35
CHRNA1P02708 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.22■□□□□ 0.35
CHRNA1P02708 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.22■□□□□ 0.35
CHRNA1P02708 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHRNA1P02708 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
CHRNA1P02708 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHRNA1P02708 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.22■□□□□ 0.35
CHRNA1P02708 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHRNA1P02708 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CHRNA1P02708 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CHRNA1P02708 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA1P02708 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA1P02708 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA1P02708 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHRNA1P02708 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA1P02708 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 AD000864.1-201ENST00000624076 2295 ntBASIC17.21■□□□□ 0.35
CHRNA1P02708 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA1P02708 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.21■□□□□ 0.35
CHRNA1P02708 AC106760.1-201ENST00000508690 800 ntBASIC17.21■□□□□ 0.35
CHRNA1P02708 RNA5SP412-201ENST00000516234 123 ntBASIC17.21■□□□□ 0.35
CHRNA1P02708 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.21■□□□□ 0.35
CHRNA1P02708 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.21■□□□□ 0.35
CHRNA1P02708 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 AC244669.2-201ENST00000612320 853 ntBASIC17.21■□□□□ 0.35
CHRNA1P02708 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CHRNA1P02708 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHRNA1P02708 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHRNA1P02708 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.21■□□□□ 0.34
CHRNA1P02708 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.21■□□□□ 0.34
CHRNA1P02708 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA1P02708 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHRNA1P02708 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHRNA1P02708 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA1P02708 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRNA1P02708 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms