Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.33□□□□□ -0.12
APOA1P02647 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.33□□□□□ -0.12
APOA1P02647 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.33□□□□□ -0.12
APOA1P02647 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
APOA1P02647 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.33□□□□□ -0.12
APOA1P02647 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.33□□□□□ -0.12
APOA1P02647 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.33□□□□□ -0.12
APOA1P02647 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
APOA1P02647 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
APOA1P02647 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
APOA1P02647 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 TOP3BP1-201ENST00000420768 1380 ntBASIC14.33□□□□□ -0.12
APOA1P02647 AC243591.1-201ENST00000452967 1364 ntBASIC14.33□□□□□ -0.12
APOA1P02647 LINC01568-207ENST00000641790 1380 ntBASIC14.33□□□□□ -0.12
APOA1P02647 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 GPAA1P2-202ENST00000606848 1787 ntBASIC14.32□□□□□ -0.12
APOA1P02647 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.32□□□□□ -0.12
APOA1P02647 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
APOA1P02647 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.32□□□□□ -0.12
APOA1P02647 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.32□□□□□ -0.12
APOA1P02647 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 AC008550.1-201ENST00000511500 884 ntBASIC14.32□□□□□ -0.12
APOA1P02647 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.32□□□□□ -0.12
APOA1P02647 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.32□□□□□ -0.12
APOA1P02647 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
APOA1P02647 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.32□□□□□ -0.12
APOA1P02647 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms