Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.25□□□□□ -0.13
PFDN1O60925 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.25□□□□□ -0.13
PFDN1O60925 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PFDN1O60925 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PFDN1O60925 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.25□□□□□ -0.13
PFDN1O60925 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.25□□□□□ -0.13
PFDN1O60925 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC14.25□□□□□ -0.13
PFDN1O60925 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PFDN1O60925 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.25□□□□□ -0.13
PFDN1O60925 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PFDN1O60925 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.25□□□□□ -0.13
PFDN1O60925 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PFDN1O60925 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 AC016769.1-201ENST00000409132 1010 ntBASIC14.24□□□□□ -0.13
PFDN1O60925 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.24□□□□□ -0.13
PFDN1O60925 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.24□□□□□ -0.13
PFDN1O60925 NTF6G-201ENST00000591094 616 ntBASIC14.24□□□□□ -0.13
PFDN1O60925 AC008622.2-201ENST00000617006 1229 ntBASIC14.24□□□□□ -0.13
PFDN1O60925 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PFDN1O60925 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 AC092368.3-202ENST00000574180 1591 ntBASIC14.24□□□□□ -0.13
PFDN1O60925 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.24□□□□□ -0.13
PFDN1O60925 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PFDN1O60925 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PFDN1O60925 TRIM80P-201ENST00000455685 2848 ntBASIC14.23□□□□□ -0.13
PFDN1O60925 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 PCDHA5-203ENST00000614258 4248 ntBASIC14.23□□□□□ -0.13
PFDN1O60925 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PFDN1O60925 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.23□□□□□ -0.13
PFDN1O60925 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PFDN1O60925 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms