Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.3■□□□□ 0.04
PRICKLE3O43900 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 AC074044.1-201ENST00000609673 707 ntBASIC15.3■□□□□ 0.04
PRICKLE3O43900 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 AL607033.1-201ENST00000623900 1599 ntBASIC15.3■□□□□ 0.04
PRICKLE3O43900 AC011270.2-201ENST00000624293 2550 ntBASIC15.3■□□□□ 0.04
PRICKLE3O43900 AC004461.2-201ENST00000629517 803 ntBASIC15.3■□□□□ 0.04
PRICKLE3O43900 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.3■□□□□ 0.04
PRICKLE3O43900 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 CICP6-201ENST00000457191 2729 ntBASIC15.3■□□□□ 0.04
PRICKLE3O43900 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRICKLE3O43900 AC046158.3-201ENST00000624947 2558 ntBASIC15.3■□□□□ 0.04
PRICKLE3O43900 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 RPL13P2-201ENST00000440687 659 ntBASIC15.29■□□□□ 0.04
PRICKLE3O43900 TSPY16P-201ENST00000449843 468 ntBASIC15.29■□□□□ 0.04
PRICKLE3O43900 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 NFIC-211ENST00000641145 8399 ntBASIC15.29■□□□□ 0.04
PRICKLE3O43900 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRICKLE3O43900 AP005117.1-202ENST00000581724 1908 ntBASIC15.29■□□□□ 0.04
PRICKLE3O43900 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.29■□□□□ 0.04
PRICKLE3O43900 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 AC022188.1-201ENST00000620960 1664 ntBASIC15.28■□□□□ 0.04
PRICKLE3O43900 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms