Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 AL079307.3-201ENST00000556114 283 ntBASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 MIR6069-201ENST00000620069 79 ntBASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 KRT8P12-202ENST00000472924 1397 ntBASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM9A6NGZ8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 AC006449.5-201ENST00000610658 2098 ntBASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 MIR943-201ENST00000401286 94 ntBASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 AL133215.2-201ENST00000609242 977 ntBASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.61□□□□□ -0.55
SMIM9A6NGZ8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
SMIM9A6NGZ8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM9A6NGZ8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.6□□□□□ -0.55
SMIM9A6NGZ8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.6□□□□□ -0.55
SMIM9A6NGZ8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SMIM9A6NGZ8 AC011477.6-201ENST00000604980 1927 ntBASIC11.6□□□□□ -0.55
SMIM9A6NGZ8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM9A6NGZ8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM9A6NGZ8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMIM9A6NGZ8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms