Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 GGT3P-204ENST00000453783 1664 ntBASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 HLA-A-202ENST00000376806 1854 ntBASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 AL035456.1-201ENST00000456064 1369 ntBASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LRCOL1A6NCL2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 AC073592.8-201ENST00000624126 511 ntBASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 LINC01144-201ENST00000626198 1710 ntBASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.77□□□□□ -0.69
LRCOL1A6NCL2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 AC011676.5-201ENST00000624864 2660 ntBASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LRCOL1A6NCL2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms