Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC106739.1-201ENST00000617035 715 ntBASIC24.87■■□□□ 1.57
HCFC2Q9Y5Z7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
HCFC2Q9Y5Z7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HCFC2Q9Y5Z7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HCFC2Q9Y5Z7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
HCFC2Q9Y5Z7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.86■■□□□ 1.57
HCFC2Q9Y5Z7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
HCFC2Q9Y5Z7 PBX2P1-201ENST00000493219 1291 ntBASIC24.86■■□□□ 1.57
HCFC2Q9Y5Z7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.86■■□□□ 1.57
HCFC2Q9Y5Z7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HCFC2Q9Y5Z7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HCFC2Q9Y5Z7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HCFC2Q9Y5Z7 ZNRF2P3-201ENST00000424200 374 ntBASIC24.85■■□□□ 1.57
HCFC2Q9Y5Z7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.85■■□□□ 1.57
HCFC2Q9Y5Z7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.85■■□□□ 1.57
HCFC2Q9Y5Z7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HCFC2Q9Y5Z7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HCFC2Q9Y5Z7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HCFC2Q9Y5Z7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
HCFC2Q9Y5Z7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.84■■□□□ 1.57
HCFC2Q9Y5Z7 SNX5-217ENST00000606557 1087 ntBASIC24.84■■□□□ 1.57
HCFC2Q9Y5Z7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.84■■□□□ 1.57
HCFC2Q9Y5Z7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HCFC2Q9Y5Z7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HCFC2Q9Y5Z7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HCFC2Q9Y5Z7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HCFC2Q9Y5Z7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HCFC2Q9Y5Z7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HCFC2Q9Y5Z7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HCFC2Q9Y5Z7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.83■■□□□ 1.57
HCFC2Q9Y5Z7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HCFC2Q9Y5Z7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HCFC2Q9Y5Z7 AC142086.6-201ENST00000621154 1765 ntBASIC24.82■■□□□ 1.56
HCFC2Q9Y5Z7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.82■■□□□ 1.56
HCFC2Q9Y5Z7 MIR6722-201ENST00000617286 78 ntBASIC24.82■■□□□ 1.56
HCFC2Q9Y5Z7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HCFC2Q9Y5Z7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.81■■□□□ 1.56
HCFC2Q9Y5Z7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HCFC2Q9Y5Z7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.81■■□□□ 1.56
HCFC2Q9Y5Z7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.81■■□□□ 1.56
HCFC2Q9Y5Z7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HCFC2Q9Y5Z7 AC142381.2-201ENST00000566120 298 ntBASIC24.81■■□□□ 1.56
HCFC2Q9Y5Z7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.81■■□□□ 1.56
HCFC2Q9Y5Z7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HCFC2Q9Y5Z7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HCFC2Q9Y5Z7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.8■■□□□ 1.56
HCFC2Q9Y5Z7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HCFC2Q9Y5Z7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
HCFC2Q9Y5Z7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.8■■□□□ 1.56
HCFC2Q9Y5Z7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.79■■□□□ 1.56
HCFC2Q9Y5Z7 RARRES2P6-201ENST00000567333 442 ntBASIC24.79■■□□□ 1.56
HCFC2Q9Y5Z7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HCFC2Q9Y5Z7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HCFC2Q9Y5Z7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 UNC93B3-201ENST00000308076 687 ntBASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
HCFC2Q9Y5Z7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 AL031432.3-201ENST00000607698 485 ntBASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 AC090877.2-201ENST00000558441 1738 ntBASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HCFC2Q9Y5Z7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.76■■□□□ 1.55
HCFC2Q9Y5Z7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
HCFC2Q9Y5Z7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.76■■□□□ 1.55
HCFC2Q9Y5Z7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.76■■□□□ 1.55
HCFC2Q9Y5Z7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
HCFC2Q9Y5Z7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HCFC2Q9Y5Z7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.75■■□□□ 1.55
HCFC2Q9Y5Z7 AL136162.1-201ENST00000607711 1078 ntBASIC24.75■■□□□ 1.55
HCFC2Q9Y5Z7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.75■■□□□ 1.55
HCFC2Q9Y5Z7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
HCFC2Q9Y5Z7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HCFC2Q9Y5Z7 SUDS3P1-201ENST00000505831 966 ntBASIC24.74■■□□□ 1.55
HCFC2Q9Y5Z7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.74■■□□□ 1.55
HCFC2Q9Y5Z7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.74■■□□□ 1.55
HCFC2Q9Y5Z7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
HCFC2Q9Y5Z7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
HCFC2Q9Y5Z7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
HCFC2Q9Y5Z7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
HCFC2Q9Y5Z7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HCFC2Q9Y5Z7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HCFC2Q9Y5Z7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.73■■□□□ 1.55
HCFC2Q9Y5Z7 AC135279.3-201ENST00000610945 1311 ntBASIC24.72■■□□□ 1.55
HCFC2Q9Y5Z7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
HCFC2Q9Y5Z7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.72■■□□□ 1.55
HCFC2Q9Y5Z7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HCFC2Q9Y5Z7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms