Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.52■■□□□ 1.68
PCDHB7Q9Y5E2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHB7Q9Y5E2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDHB7Q9Y5E2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHB7Q9Y5E2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHB7Q9Y5E2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHB7Q9Y5E2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHB7Q9Y5E2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHB7Q9Y5E2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHB7Q9Y5E2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHB7Q9Y5E2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.51■■□□□ 1.67
PCDHB7Q9Y5E2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
PCDHB7Q9Y5E2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDHB7Q9Y5E2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB7Q9Y5E2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB7Q9Y5E2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB7Q9Y5E2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
PCDHB7Q9Y5E2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDHB7Q9Y5E2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHB7Q9Y5E2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDHB7Q9Y5E2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHB7Q9Y5E2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHB7Q9Y5E2 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.49■■□□□ 1.67
PCDHB7Q9Y5E2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.49■■□□□ 1.67
PCDHB7Q9Y5E2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
PCDHB7Q9Y5E2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHB7Q9Y5E2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHB7Q9Y5E2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHB7Q9Y5E2 MIR4466-201ENST00000606121 54 ntBASIC25.48■■□□□ 1.67
PCDHB7Q9Y5E2 AC090877.2-201ENST00000558441 1738 ntBASIC25.48■■□□□ 1.67
PCDHB7Q9Y5E2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
PCDHB7Q9Y5E2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHB7Q9Y5E2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
PCDHB7Q9Y5E2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.47■■□□□ 1.67
PCDHB7Q9Y5E2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB7Q9Y5E2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB7Q9Y5E2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.46■■□□□ 1.67
PCDHB7Q9Y5E2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHB7Q9Y5E2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB7Q9Y5E2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB7Q9Y5E2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHB7Q9Y5E2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB7Q9Y5E2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB7Q9Y5E2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
PCDHB7Q9Y5E2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
PCDHB7Q9Y5E2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHB7Q9Y5E2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHB7Q9Y5E2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PCDHB7Q9Y5E2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
PCDHB7Q9Y5E2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHB7Q9Y5E2 AC097639.1-201ENST00000565519 1891 ntBASIC25.45■■□□□ 1.66
PCDHB7Q9Y5E2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHB7Q9Y5E2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHB7Q9Y5E2 AC096631.2-201ENST00000436136 790 ntBASIC25.44■■□□□ 1.66
PCDHB7Q9Y5E2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHB7Q9Y5E2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.44■■□□□ 1.66
PCDHB7Q9Y5E2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDHB7Q9Y5E2 AC110285.6-201ENST00000617652 491 ntBASIC25.44■■□□□ 1.66
PCDHB7Q9Y5E2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHB7Q9Y5E2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHB7Q9Y5E2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB7Q9Y5E2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.43■■□□□ 1.66
PCDHB7Q9Y5E2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB7Q9Y5E2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB7Q9Y5E2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.42■■□□□ 1.66
PCDHB7Q9Y5E2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB7Q9Y5E2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHB7Q9Y5E2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB7Q9Y5E2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.42■■□□□ 1.66
PCDHB7Q9Y5E2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHB7Q9Y5E2 AL512631.2-201ENST00000604634 923 ntBASIC25.42■■□□□ 1.66
PCDHB7Q9Y5E2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.42■■□□□ 1.66
PCDHB7Q9Y5E2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB7Q9Y5E2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB7Q9Y5E2 ERN1-208ENST00000606895 2068 ntBASIC25.41■■□□□ 1.66
PCDHB7Q9Y5E2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB7Q9Y5E2 AC096887.2-201ENST00000623443 1957 ntBASIC25.4■■□□□ 1.66
PCDHB7Q9Y5E2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB7Q9Y5E2 SNX5-217ENST00000606557 1087 ntBASIC25.4■■□□□ 1.66
PCDHB7Q9Y5E2 MIR6722-201ENST00000617286 78 ntBASIC25.4■■□□□ 1.66
PCDHB7Q9Y5E2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB7Q9Y5E2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHB7Q9Y5E2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHB7Q9Y5E2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHB7Q9Y5E2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.39■■□□□ 1.66
PCDHB7Q9Y5E2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.39■■□□□ 1.66
PCDHB7Q9Y5E2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHB7Q9Y5E2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
PCDHB7Q9Y5E2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB7Q9Y5E2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB7Q9Y5E2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB7Q9Y5E2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHB7Q9Y5E2 AC005837.3-201ENST00000612163 286 ntBASIC25.38■■□□□ 1.65
PCDHB7Q9Y5E2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDHB7Q9Y5E2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB7Q9Y5E2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
PCDHB7Q9Y5E2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB7Q9Y5E2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB7Q9Y5E2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB7Q9Y5E2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms