Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MRPS28Q9Y2Q9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
MRPS28Q9Y2Q9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MRPS28Q9Y2Q9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MRPS28Q9Y2Q9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.14■□□□□ 0.81
MRPS28Q9Y2Q9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MRPS28Q9Y2Q9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.14■□□□□ 0.81
MRPS28Q9Y2Q9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MRPS28Q9Y2Q9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MRPS28Q9Y2Q9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MRPS28Q9Y2Q9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MRPS28Q9Y2Q9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 MIR7108-201ENST00000614319 87 ntBASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPS28Q9Y2Q9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 RP9P-202ENST00000450133 1212 ntBASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.11■□□□□ 0.81
MRPS28Q9Y2Q9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPS28Q9Y2Q9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.1■□□□□ 0.81
MRPS28Q9Y2Q9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPS28Q9Y2Q9 ECEL1P2-201ENST00000461596 1295 ntBASIC20.1■□□□□ 0.81
MRPS28Q9Y2Q9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.1■□□□□ 0.81
MRPS28Q9Y2Q9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPS28Q9Y2Q9 AC004812.2-201ENST00000611079 2094 ntBASIC20.09■□□□□ 0.81
MRPS28Q9Y2Q9 AC093536.1-201ENST00000569153 554 ntBASIC20.09■□□□□ 0.81
MRPS28Q9Y2Q9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MRPS28Q9Y2Q9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPS28Q9Y2Q9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.08■□□□□ 0.81
MRPS28Q9Y2Q9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MRPS28Q9Y2Q9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.08■□□□□ 0.8
MRPS28Q9Y2Q9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MRPS28Q9Y2Q9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.08■□□□□ 0.8
MRPS28Q9Y2Q9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MRPS28Q9Y2Q9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPS28Q9Y2Q9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MRPS28Q9Y2Q9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MRPS28Q9Y2Q9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRPS28Q9Y2Q9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.06■□□□□ 0.8
MRPS28Q9Y2Q9 AC022413.1-201ENST00000624602 984 ntBASIC20.06■□□□□ 0.8
MRPS28Q9Y2Q9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.06■□□□□ 0.8
MRPS28Q9Y2Q9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRPS28Q9Y2Q9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRPS28Q9Y2Q9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.06■□□□□ 0.8
MRPS28Q9Y2Q9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPS28Q9Y2Q9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPS28Q9Y2Q9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.04■□□□□ 0.8
MRPS28Q9Y2Q9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPS28Q9Y2Q9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
MRPS28Q9Y2Q9 AC133561.1-201ENST00000568600 2415 ntBASIC20.04■□□□□ 0.8
MRPS28Q9Y2Q9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MRPS28Q9Y2Q9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MRPS28Q9Y2Q9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MRPS28Q9Y2Q9 ABCB10P4-201ENST00000566803 2184 ntBASIC20.03■□□□□ 0.8
MRPS28Q9Y2Q9 MIR639-201ENST00000384974 98 ntBASIC20.03■□□□□ 0.8
MRPS28Q9Y2Q9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MRPS28Q9Y2Q9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.03■□□□□ 0.8
MRPS28Q9Y2Q9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms