Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC026271.2-201ENST00000428091 497 ntBASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NOTCH3Q9UM47 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18■□□□□ 0.47
NOTCH3Q9UM47 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18■□□□□ 0.47
NOTCH3Q9UM47 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NOTCH3Q9UM47 AL512631.2-201ENST00000604634 923 ntBASIC18■□□□□ 0.47
NOTCH3Q9UM47 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NOTCH3Q9UM47 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NOTCH3Q9UM47 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NOTCH3Q9UM47 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NOTCH3Q9UM47 MIR6724-1-201ENST00000616420 92 ntBASIC18■□□□□ 0.47
NOTCH3Q9UM47 MIR6724-2-201ENST00000616483 92 ntBASIC18■□□□□ 0.47
NOTCH3Q9UM47 MIR6724-4-201ENST00000617390 92 ntBASIC18■□□□□ 0.47
NOTCH3Q9UM47 MIR6724-3-201ENST00000622482 92 ntBASIC18■□□□□ 0.47
NOTCH3Q9UM47 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NOTCH3Q9UM47 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.99■□□□□ 0.47
NOTCH3Q9UM47 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.99■□□□□ 0.47
NOTCH3Q9UM47 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NOTCH3Q9UM47 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.99■□□□□ 0.47
NOTCH3Q9UM47 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NOTCH3Q9UM47 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NOTCH3Q9UM47 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 MTDHP2-201ENST00000601468 714 ntBASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 AC011551.1-201ENST00000614101 683 ntBASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NOTCH3Q9UM47 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NOTCH3Q9UM47 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NOTCH3Q9UM47 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NOTCH3Q9UM47 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NOTCH3Q9UM47 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NOTCH3Q9UM47 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 AF131216.4-201ENST00000638924 1588 ntBASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
NOTCH3Q9UM47 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH3Q9UM47 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH3Q9UM47 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NOTCH3Q9UM47 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH3Q9UM47 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH3Q9UM47 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH3Q9UM47 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NOTCH3Q9UM47 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.94■□□□□ 0.46
NOTCH3Q9UM47 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NOTCH3Q9UM47 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH3Q9UM47 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH3Q9UM47 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NOTCH3Q9UM47 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.93■□□□□ 0.46
NOTCH3Q9UM47 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NOTCH3Q9UM47 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NOTCH3Q9UM47 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.92■□□□□ 0.46
NOTCH3Q9UM47 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NOTCH3Q9UM47 AC106739.1-201ENST00000617035 715 ntBASIC17.92■□□□□ 0.46
NOTCH3Q9UM47 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.92■□□□□ 0.46
NOTCH3Q9UM47 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NOTCH3Q9UM47 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.92■□□□□ 0.46
NOTCH3Q9UM47 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NOTCH3Q9UM47 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NOTCH3Q9UM47 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.91■□□□□ 0.46
NOTCH3Q9UM47 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NOTCH3Q9UM47 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NOTCH3Q9UM47 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.91■□□□□ 0.46
NOTCH3Q9UM47 AP004609.3-201ENST00000610705 1884 ntBASIC17.91■□□□□ 0.46
NOTCH3Q9UM47 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NOTCH3Q9UM47 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NOTCH3Q9UM47 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NOTCH3Q9UM47 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms