Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
PCDHB16Q9NRJ7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB16Q9NRJ7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB16Q9NRJ7 AL157400.5-201ENST00000507624 621 ntBASIC20.2■□□□□ 0.82
PCDHB16Q9NRJ7 MIR4449-201ENST00000578365 66 ntBASIC20.2■□□□□ 0.82
PCDHB16Q9NRJ7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PCDHB16Q9NRJ7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB16Q9NRJ7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB16Q9NRJ7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHB16Q9NRJ7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB16Q9NRJ7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB16Q9NRJ7 SLC6A10P-202ENST00000431994 2058 ntBASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 KRT18P10-201ENST00000388836 1287 ntBASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 ECEL1P2-201ENST00000461596 1295 ntBASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB16Q9NRJ7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB16Q9NRJ7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB16Q9NRJ7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB16Q9NRJ7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB16Q9NRJ7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB16Q9NRJ7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB16Q9NRJ7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB16Q9NRJ7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB16Q9NRJ7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB16Q9NRJ7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHB16Q9NRJ7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB16Q9NRJ7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB16Q9NRJ7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 AC092296.2-201ENST00000589470 999 ntBASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB16Q9NRJ7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHB16Q9NRJ7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHB16Q9NRJ7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHB16Q9NRJ7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHB16Q9NRJ7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHB16Q9NRJ7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHB16Q9NRJ7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHB16Q9NRJ7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDHB16Q9NRJ7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB16Q9NRJ7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHB16Q9NRJ7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB16Q9NRJ7 AC141586.4-201ENST00000624558 1573 ntBASIC20.13■□□□□ 0.81
PCDHB16Q9NRJ7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHB16Q9NRJ7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHB16Q9NRJ7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB16Q9NRJ7 RP9P-202ENST00000450133 1212 ntBASIC20.13■□□□□ 0.81
PCDHB16Q9NRJ7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.13■□□□□ 0.81
PCDHB16Q9NRJ7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB16Q9NRJ7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB16Q9NRJ7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB16Q9NRJ7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB16Q9NRJ7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB16Q9NRJ7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB16Q9NRJ7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB16Q9NRJ7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHB16Q9NRJ7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB16Q9NRJ7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB16Q9NRJ7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB16Q9NRJ7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB16Q9NRJ7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB16Q9NRJ7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHB16Q9NRJ7 AC022413.1-201ENST00000624602 984 ntBASIC20.11■□□□□ 0.81
PCDHB16Q9NRJ7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHB16Q9NRJ7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB16Q9NRJ7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB16Q9NRJ7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHB16Q9NRJ7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 LINC01124-201ENST00000409786 2117 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms