Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
VPS33BQ9H267 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
VPS33BQ9H267 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
VPS33BQ9H267 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.73■■■□□ 2.19
VPS33BQ9H267 AL355001.2-201ENST00000620617 1191 ntBASIC28.73■■■□□ 2.19
VPS33BQ9H267 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
VPS33BQ9H267 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
VPS33BQ9H267 AC090877.2-201ENST00000558441 1738 ntBASIC28.72■■■□□ 2.19
VPS33BQ9H267 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.72■■■□□ 2.19
VPS33BQ9H267 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
VPS33BQ9H267 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.72■■■□□ 2.19
VPS33BQ9H267 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
VPS33BQ9H267 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
VPS33BQ9H267 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.72■■■□□ 2.19
VPS33BQ9H267 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.72■■■□□ 2.19
VPS33BQ9H267 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
VPS33BQ9H267 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.71■■■□□ 2.19
VPS33BQ9H267 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
VPS33BQ9H267 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
VPS33BQ9H267 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
VPS33BQ9H267 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
VPS33BQ9H267 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
VPS33BQ9H267 SRD5A1P1-201ENST00000442297 786 ntBASIC28.7■■■□□ 2.18
VPS33BQ9H267 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.7■■■□□ 2.18
VPS33BQ9H267 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.7■■■□□ 2.18
VPS33BQ9H267 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.7■■■□□ 2.18
VPS33BQ9H267 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.7■■■□□ 2.18
VPS33BQ9H267 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
VPS33BQ9H267 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
VPS33BQ9H267 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.69■■■□□ 2.18
VPS33BQ9H267 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC28.69■■■□□ 2.18
VPS33BQ9H267 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.69■■■□□ 2.18
VPS33BQ9H267 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.69■■■□□ 2.18
VPS33BQ9H267 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
VPS33BQ9H267 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
VPS33BQ9H267 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
VPS33BQ9H267 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
VPS33BQ9H267 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
VPS33BQ9H267 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.67■■■□□ 2.18
VPS33BQ9H267 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.67■■■□□ 2.18
VPS33BQ9H267 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.67■■■□□ 2.18
VPS33BQ9H267 MIR5787-201ENST00000611784 55 ntBASIC28.67■■■□□ 2.18
VPS33BQ9H267 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
VPS33BQ9H267 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
VPS33BQ9H267 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
VPS33BQ9H267 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
VPS33BQ9H267 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.66■■■□□ 2.18
VPS33BQ9H267 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.66■■■□□ 2.18
VPS33BQ9H267 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.66■■■□□ 2.18
VPS33BQ9H267 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
VPS33BQ9H267 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
VPS33BQ9H267 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
VPS33BQ9H267 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
VPS33BQ9H267 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
VPS33BQ9H267 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.65■■■□□ 2.18
VPS33BQ9H267 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.65■■■□□ 2.18
VPS33BQ9H267 AC024257.2-201ENST00000549699 147 ntBASIC28.65■■■□□ 2.18
VPS33BQ9H267 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.65■■■□□ 2.18
VPS33BQ9H267 AC104564.3-201ENST00000582367 638 ntBASIC28.65■■■□□ 2.18
VPS33BQ9H267 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.65■■■□□ 2.18
VPS33BQ9H267 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
VPS33BQ9H267 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.65■■■□□ 2.18
VPS33BQ9H267 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
VPS33BQ9H267 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
VPS33BQ9H267 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
VPS33BQ9H267 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.17
VPS33BQ9H267 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.64■■■□□ 2.17
VPS33BQ9H267 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.63■■■□□ 2.17
VPS33BQ9H267 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
VPS33BQ9H267 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
VPS33BQ9H267 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
VPS33BQ9H267 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
VPS33BQ9H267 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.63■■■□□ 2.17
VPS33BQ9H267 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.63■■■□□ 2.17
VPS33BQ9H267 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
VPS33BQ9H267 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
VPS33BQ9H267 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.62■■■□□ 2.17
VPS33BQ9H267 DUX4L19-201ENST00000557448 1267 ntBASIC28.62■■■□□ 2.17
VPS33BQ9H267 AL136967.2-201ENST00000623968 743 ntBASIC28.62■■■□□ 2.17
VPS33BQ9H267 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
VPS33BQ9H267 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
VPS33BQ9H267 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
VPS33BQ9H267 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
VPS33BQ9H267 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.61■■■□□ 2.17
VPS33BQ9H267 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
VPS33BQ9H267 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
VPS33BQ9H267 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
VPS33BQ9H267 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
VPS33BQ9H267 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.6■■■□□ 2.17
VPS33BQ9H267 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
VPS33BQ9H267 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.6■■■□□ 2.17
VPS33BQ9H267 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
VPS33BQ9H267 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
VPS33BQ9H267 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
VPS33BQ9H267 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
VPS33BQ9H267 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
VPS33BQ9H267 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.58■■■□□ 2.17
VPS33BQ9H267 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
VPS33BQ9H267 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.58■■■□□ 2.17
VPS33BQ9H267 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms