Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A7Q99884 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A7Q99884 AL359258.2-201ENST00000564063 1566 ntBASIC20.26■□□□□ 0.83
SLC6A7Q99884 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A7Q99884 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A7Q99884 AC012676.1-201ENST00000574705 1949 ntBASIC20.26■□□□□ 0.83
SLC6A7Q99884 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC6A7Q99884 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC6A7Q99884 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A7Q99884 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC6A7Q99884 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A7Q99884 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC6A7Q99884 AC133552.2-201ENST00000619106 1032 ntBASIC20.26■□□□□ 0.83
SLC6A7Q99884 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
SLC6A7Q99884 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A7Q99884 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A7Q99884 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A7Q99884 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A7Q99884 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SLC6A7Q99884 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A7Q99884 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A7Q99884 AL592293.1-201ENST00000502889 1188 ntBASIC20.25■□□□□ 0.83
SLC6A7Q99884 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A7Q99884 DUX4L18-201ENST00000553347 1267 ntBASIC20.25■□□□□ 0.83
SLC6A7Q99884 AC129492.7-201ENST00000622992 756 ntBASIC20.25■□□□□ 0.83
SLC6A7Q99884 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A7Q99884 AC009831.1-201ENST00000580420 1582 ntBASIC20.25■□□□□ 0.83
SLC6A7Q99884 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A7Q99884 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A7Q99884 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC6A7Q99884 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A7Q99884 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A7Q99884 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A7Q99884 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC6A7Q99884 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SLC6A7Q99884 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A7Q99884 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SLC6A7Q99884 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC6A7Q99884 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC6A7Q99884 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SLC6A7Q99884 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SLC6A7Q99884 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 SMPD5-203ENST00000639008 1464 ntBASIC20.23■□□□□ 0.83
SLC6A7Q99884 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SLC6A7Q99884 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A7Q99884 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC6A7Q99884 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A7Q99884 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A7Q99884 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A7Q99884 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SLC6A7Q99884 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC6A7Q99884 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC6A7Q99884 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC6A7Q99884 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC6A7Q99884 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
SLC6A7Q99884 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A7Q99884 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A7Q99884 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SLC6A7Q99884 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC6A7Q99884 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A7Q99884 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A7Q99884 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A7Q99884 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC6A7Q99884 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SLC6A7Q99884 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A7Q99884 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC6A7Q99884 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC6A7Q99884 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A7Q99884 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SLC6A7Q99884 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A7Q99884 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A7Q99884 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A7Q99884 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A7Q99884 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC6A7Q99884 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC6A7Q99884 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC6A7Q99884 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A7Q99884 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC6A7Q99884 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC6A7Q99884 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A7Q99884 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A7Q99884 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A7Q99884 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
SLC6A7Q99884 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A7Q99884 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC6A7Q99884 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC6A7Q99884 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SLC6A7Q99884 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC6A7Q99884 AC068473.5-201ENST00000616428 2072 ntBASIC20.18■□□□□ 0.82
SLC6A7Q99884 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC6A7Q99884 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms