Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC103834.1-201ENST00000520383 144 ntBASIC19.66■□□□□ 0.74
CCL13Q99616 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCL13Q99616 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL13Q99616 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL13Q99616 AC022211.4-201ENST00000625094 2161 ntBASIC19.66■□□□□ 0.74
CCL13Q99616 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL13Q99616 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL13Q99616 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCL13Q99616 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.65■□□□□ 0.74
CCL13Q99616 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL13Q99616 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL13Q99616 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL13Q99616 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL13Q99616 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL13Q99616 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL13Q99616 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.65■□□□□ 0.74
CCL13Q99616 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCL13Q99616 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.64■□□□□ 0.74
CCL13Q99616 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL13Q99616 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CCL13Q99616 AC022616.5-201ENST00000518796 181 ntBASIC19.64■□□□□ 0.73
CCL13Q99616 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.64■□□□□ 0.73
CCL13Q99616 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL13Q99616 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL13Q99616 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL13Q99616 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL13Q99616 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL13Q99616 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL13Q99616 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCL13Q99616 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL13Q99616 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL13Q99616 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL13Q99616 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL13Q99616 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL13Q99616 MIR4508-201ENST00000584178 70 ntBASIC19.63■□□□□ 0.73
CCL13Q99616 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL13Q99616 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL13Q99616 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL13Q99616 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL13Q99616 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.62■□□□□ 0.73
CCL13Q99616 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCL13Q99616 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCL13Q99616 RARRES2P1-201ENST00000474487 481 ntBASIC19.62■□□□□ 0.73
CCL13Q99616 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.62■□□□□ 0.73
CCL13Q99616 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL13Q99616 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCL13Q99616 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL13Q99616 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL13Q99616 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL13Q99616 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL13Q99616 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
CCL13Q99616 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCL13Q99616 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCL13Q99616 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL13Q99616 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL13Q99616 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL13Q99616 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.61■□□□□ 0.73
CCL13Q99616 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL13Q99616 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCL13Q99616 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL13Q99616 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL13Q99616 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL13Q99616 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL13Q99616 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
CCL13Q99616 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.59■□□□□ 0.73
CCL13Q99616 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL13Q99616 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.59■□□□□ 0.73
CCL13Q99616 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.59■□□□□ 0.73
CCL13Q99616 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.59■□□□□ 0.73
CCL13Q99616 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCL13Q99616 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.59■□□□□ 0.73
CCL13Q99616 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCL13Q99616 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCL13Q99616 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCL13Q99616 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.58■□□□□ 0.73
CCL13Q99616 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL13Q99616 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.58■□□□□ 0.72
CCL13Q99616 AC103724.3-201ENST00000564481 992 ntBASIC19.58■□□□□ 0.72
CCL13Q99616 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.58■□□□□ 0.72
CCL13Q99616 AC142381.3-201ENST00000568208 1670 ntBASIC19.58■□□□□ 0.72
CCL13Q99616 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL13Q99616 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCL13Q99616 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCL13Q99616 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCL13Q99616 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCL13Q99616 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCL13Q99616 AC120024.1-201ENST00000562672 995 ntBASIC19.57■□□□□ 0.72
CCL13Q99616 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.57■□□□□ 0.72
CCL13Q99616 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.57■□□□□ 0.72
CCL13Q99616 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.57■□□□□ 0.72
CCL13Q99616 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.57■□□□□ 0.72
CCL13Q99616 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.57■□□□□ 0.72
CCL13Q99616 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCL13Q99616 AC138932.3-201ENST00000567634 1902 ntBASIC19.57■□□□□ 0.72
CCL13Q99616 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL13Q99616 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCL13Q99616 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.56■□□□□ 0.72
CCL13Q99616 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.56■□□□□ 0.72
CCL13Q99616 THA1P-201ENST00000590384 1145 ntBASIC19.56■□□□□ 0.72
CCL13Q99616 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms