Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CITED4Q96RK1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CITED4Q96RK1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CITED4Q96RK1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CITED4Q96RK1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CITED4Q96RK1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CITED4Q96RK1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CITED4Q96RK1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CITED4Q96RK1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CITED4Q96RK1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CITED4Q96RK1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CITED4Q96RK1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CITED4Q96RK1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CITED4Q96RK1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.85■□□□□ 0.77
CITED4Q96RK1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CITED4Q96RK1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CITED4Q96RK1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.84■□□□□ 0.77
CITED4Q96RK1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CITED4Q96RK1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CITED4Q96RK1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CITED4Q96RK1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CITED4Q96RK1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CITED4Q96RK1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CITED4Q96RK1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CITED4Q96RK1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CITED4Q96RK1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CITED4Q96RK1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CITED4Q96RK1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.84■□□□□ 0.77
CITED4Q96RK1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CITED4Q96RK1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CITED4Q96RK1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CITED4Q96RK1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CITED4Q96RK1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CITED4Q96RK1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CITED4Q96RK1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CITED4Q96RK1 ZNRF2P2-203ENST00000454624 420 ntBASIC19.83■□□□□ 0.77
CITED4Q96RK1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CITED4Q96RK1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CITED4Q96RK1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
CITED4Q96RK1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CITED4Q96RK1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.83■□□□□ 0.76
CITED4Q96RK1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.82■□□□□ 0.76
CITED4Q96RK1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CITED4Q96RK1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.82■□□□□ 0.76
CITED4Q96RK1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CITED4Q96RK1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CITED4Q96RK1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CITED4Q96RK1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.82■□□□□ 0.76
CITED4Q96RK1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CITED4Q96RK1 AC100797.4-201ENST00000631653 1827 ntBASIC19.82■□□□□ 0.76
CITED4Q96RK1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CITED4Q96RK1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CITED4Q96RK1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CITED4Q96RK1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CITED4Q96RK1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CITED4Q96RK1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CITED4Q96RK1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CITED4Q96RK1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CITED4Q96RK1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CITED4Q96RK1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CITED4Q96RK1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CITED4Q96RK1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CITED4Q96RK1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CITED4Q96RK1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CITED4Q96RK1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CITED4Q96RK1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.8■□□□□ 0.76
CITED4Q96RK1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CITED4Q96RK1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CITED4Q96RK1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.8■□□□□ 0.76
CITED4Q96RK1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CITED4Q96RK1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.8■□□□□ 0.76
CITED4Q96RK1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CITED4Q96RK1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CITED4Q96RK1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.79■□□□□ 0.76
CITED4Q96RK1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CITED4Q96RK1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CITED4Q96RK1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CITED4Q96RK1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CITED4Q96RK1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CITED4Q96RK1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CITED4Q96RK1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.78■□□□□ 0.76
CITED4Q96RK1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.78■□□□□ 0.76
CITED4Q96RK1 AC096887.2-201ENST00000623443 1957 ntBASIC19.78■□□□□ 0.76
CITED4Q96RK1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.78■□□□□ 0.76
CITED4Q96RK1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CITED4Q96RK1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CITED4Q96RK1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CITED4Q96RK1 AC010864.1-201ENST00000609407 1511 ntBASIC19.77■□□□□ 0.76
CITED4Q96RK1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.77■□□□□ 0.76
CITED4Q96RK1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.77■□□□□ 0.76
CITED4Q96RK1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.77■□□□□ 0.76
CITED4Q96RK1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CITED4Q96RK1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.77■□□□□ 0.76
CITED4Q96RK1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CITED4Q96RK1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.77■□□□□ 0.75
CITED4Q96RK1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CITED4Q96RK1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.77■□□□□ 0.75
CITED4Q96RK1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CITED4Q96RK1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CITED4Q96RK1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms