Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CASD1Q96PB1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.4■■□□□ 1.66
CASD1Q96PB1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CASD1Q96PB1 MIR4466-201ENST00000606121 54 ntBASIC25.4■■□□□ 1.66
CASD1Q96PB1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.4■■□□□ 1.66
CASD1Q96PB1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CASD1Q96PB1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CASD1Q96PB1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CASD1Q96PB1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
CASD1Q96PB1 AC096887.2-201ENST00000623443 1957 ntBASIC25.4■■□□□ 1.66
CASD1Q96PB1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CASD1Q96PB1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.39■■□□□ 1.66
CASD1Q96PB1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CASD1Q96PB1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CASD1Q96PB1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASD1Q96PB1 ERN1-208ENST00000606895 2068 ntBASIC25.38■■□□□ 1.65
CASD1Q96PB1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
CASD1Q96PB1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.38■■□□□ 1.65
CASD1Q96PB1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.38■■□□□ 1.65
CASD1Q96PB1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASD1Q96PB1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
CASD1Q96PB1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CASD1Q96PB1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CASD1Q96PB1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CASD1Q96PB1 MIR935-201ENST00000401179 91 ntBASIC25.37■■□□□ 1.65
CASD1Q96PB1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CASD1Q96PB1 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.37■■□□□ 1.65
CASD1Q96PB1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CASD1Q96PB1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CASD1Q96PB1 AC090877.2-201ENST00000558441 1738 ntBASIC25.37■■□□□ 1.65
CASD1Q96PB1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CASD1Q96PB1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.36■■□□□ 1.65
CASD1Q96PB1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.36■■□□□ 1.65
CASD1Q96PB1 AL512631.2-201ENST00000604634 923 ntBASIC25.36■■□□□ 1.65
CASD1Q96PB1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CASD1Q96PB1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CASD1Q96PB1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.35■■□□□ 1.65
CASD1Q96PB1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
CASD1Q96PB1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CASD1Q96PB1 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.35■■□□□ 1.65
CASD1Q96PB1 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.35■■□□□ 1.65
CASD1Q96PB1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CASD1Q96PB1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CASD1Q96PB1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.34■■□□□ 1.65
CASD1Q96PB1 AC110285.6-201ENST00000617652 491 ntBASIC25.34■■□□□ 1.65
CASD1Q96PB1 AC097639.1-201ENST00000565519 1891 ntBASIC25.34■■□□□ 1.65
CASD1Q96PB1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CASD1Q96PB1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CASD1Q96PB1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CASD1Q96PB1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CASD1Q96PB1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.33■■□□□ 1.64
CASD1Q96PB1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
CASD1Q96PB1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CASD1Q96PB1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.32■■□□□ 1.64
CASD1Q96PB1 SNX5-217ENST00000606557 1087 ntBASIC25.32■■□□□ 1.64
CASD1Q96PB1 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.32■■□□□ 1.64
CASD1Q96PB1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CASD1Q96PB1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.32■■□□□ 1.64
CASD1Q96PB1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CASD1Q96PB1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CASD1Q96PB1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.31■■□□□ 1.64
CASD1Q96PB1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CASD1Q96PB1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.31■■□□□ 1.64
CASD1Q96PB1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CASD1Q96PB1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CASD1Q96PB1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.31■■□□□ 1.64
CASD1Q96PB1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
CASD1Q96PB1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.3■■□□□ 1.64
CASD1Q96PB1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.3■■□□□ 1.64
CASD1Q96PB1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.3■■□□□ 1.64
CASD1Q96PB1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.29■■□□□ 1.64
CASD1Q96PB1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CASD1Q96PB1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.29■■□□□ 1.64
CASD1Q96PB1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CASD1Q96PB1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.29■■□□□ 1.64
CASD1Q96PB1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.29■■□□□ 1.64
CASD1Q96PB1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CASD1Q96PB1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CASD1Q96PB1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
CASD1Q96PB1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CASD1Q96PB1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CASD1Q96PB1 AC096631.2-201ENST00000436136 790 ntBASIC25.28■■□□□ 1.64
CASD1Q96PB1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.28■■□□□ 1.64
CASD1Q96PB1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CASD1Q96PB1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.27■■□□□ 1.64
CASD1Q96PB1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.27■■□□□ 1.64
CASD1Q96PB1 MIR6722-201ENST00000617286 78 ntBASIC25.27■■□□□ 1.64
CASD1Q96PB1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.27■■□□□ 1.64
CASD1Q96PB1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CASD1Q96PB1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CASD1Q96PB1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CASD1Q96PB1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CASD1Q96PB1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CASD1Q96PB1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.26■■□□□ 1.63
CASD1Q96PB1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CASD1Q96PB1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CASD1Q96PB1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.26■■□□□ 1.63
CASD1Q96PB1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CASD1Q96PB1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CASD1Q96PB1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms