Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.5■■■□□ 2.63
CFAP53Q96M91 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.5■■■□□ 2.63
CFAP53Q96M91 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
CFAP53Q96M91 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
CFAP53Q96M91 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.49■■■□□ 2.63
CFAP53Q96M91 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CFAP53Q96M91 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CFAP53Q96M91 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.49■■■□□ 2.63
CFAP53Q96M91 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CFAP53Q96M91 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CFAP53Q96M91 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CFAP53Q96M91 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.48■■■□□ 2.63
CFAP53Q96M91 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
CFAP53Q96M91 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.48■■■□□ 2.63
CFAP53Q96M91 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.48■■■□□ 2.63
CFAP53Q96M91 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC31.47■■■□□ 2.63
CFAP53Q96M91 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CFAP53Q96M91 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
CFAP53Q96M91 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
CFAP53Q96M91 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CFAP53Q96M91 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CFAP53Q96M91 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
CFAP53Q96M91 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CFAP53Q96M91 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.45■■■□□ 2.63
CFAP53Q96M91 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.63
CFAP53Q96M91 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
CFAP53Q96M91 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CFAP53Q96M91 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
CFAP53Q96M91 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CFAP53Q96M91 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CFAP53Q96M91 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
CFAP53Q96M91 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CFAP53Q96M91 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CFAP53Q96M91 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.43■■■□□ 2.62
CFAP53Q96M91 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CFAP53Q96M91 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.42■■■□□ 2.62
CFAP53Q96M91 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFAP53Q96M91 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CFAP53Q96M91 BX664725.1-201ENST00000438252 379 ntBASIC31.42■■■□□ 2.62
CFAP53Q96M91 Z92544.1-202ENST00000571933 1220 ntBASIC31.42■■■□□ 2.62
CFAP53Q96M91 AC137630.3-201ENST00000607245 391 ntBASIC31.42■■■□□ 2.62
CFAP53Q96M91 MIR6089-201ENST00000616698 64 ntBASIC31.42■■■□□ 2.62
CFAP53Q96M91 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
CFAP53Q96M91 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.42■■■□□ 2.62
CFAP53Q96M91 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CFAP53Q96M91 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.42■■■□□ 2.62
CFAP53Q96M91 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31.41■■■□□ 2.62
CFAP53Q96M91 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CFAP53Q96M91 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CFAP53Q96M91 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.41■■■□□ 2.62
CFAP53Q96M91 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CFAP53Q96M91 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CFAP53Q96M91 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CFAP53Q96M91 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
CFAP53Q96M91 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CFAP53Q96M91 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.4■■■□□ 2.62
CFAP53Q96M91 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CFAP53Q96M91 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CFAP53Q96M91 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFAP53Q96M91 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CFAP53Q96M91 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFAP53Q96M91 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
CFAP53Q96M91 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.39■■■□□ 2.62
CFAP53Q96M91 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC31.39■■■□□ 2.62
CFAP53Q96M91 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.39■■■□□ 2.62
CFAP53Q96M91 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CFAP53Q96M91 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CFAP53Q96M91 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
CFAP53Q96M91 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
CFAP53Q96M91 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.38■■■□□ 2.61
CFAP53Q96M91 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP53Q96M91 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.38■■■□□ 2.61
CFAP53Q96M91 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
CFAP53Q96M91 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP53Q96M91 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP53Q96M91 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CFAP53Q96M91 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CFAP53Q96M91 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CFAP53Q96M91 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.37■■■□□ 2.61
CFAP53Q96M91 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CFAP53Q96M91 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CFAP53Q96M91 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
CFAP53Q96M91 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.37■■■□□ 2.61
CFAP53Q96M91 AC239859.2-201ENST00000444165 318 ntBASIC31.37■■■□□ 2.61
CFAP53Q96M91 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CFAP53Q96M91 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.37■■■□□ 2.61
CFAP53Q96M91 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CFAP53Q96M91 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CFAP53Q96M91 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CFAP53Q96M91 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CFAP53Q96M91 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.36■■■□□ 2.61
CFAP53Q96M91 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.36■■■□□ 2.61
CFAP53Q96M91 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC31.36■■■□□ 2.61
CFAP53Q96M91 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CFAP53Q96M91 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFAP53Q96M91 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFAP53Q96M91 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFAP53Q96M91 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
CFAP53Q96M91 KRT125P-201ENST00000546827 989 ntBASIC31.35■■■□□ 2.61
CFAP53Q96M91 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms