Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 DUX4L22-201ENST00000618238 1269 ntBASIC17.86■□□□□ 0.45
LINC00479Q96M42 DUX4L20-201ENST00000619712 1269 ntBASIC17.86■□□□□ 0.45
LINC00479Q96M42 DUX4L21-201ENST00000622058 1269 ntBASIC17.86■□□□□ 0.45
LINC00479Q96M42 DUX4L10-201ENST00000622460 1267 ntBASIC17.86■□□□□ 0.45
LINC00479Q96M42 DUX4L25-201ENST00000624915 1269 ntBASIC17.86■□□□□ 0.45
LINC00479Q96M42 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00479Q96M42 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00479Q96M42 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC00479Q96M42 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00479Q96M42 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00479Q96M42 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC00479Q96M42 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LINC00479Q96M42 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.86■□□□□ 0.45
LINC00479Q96M42 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC00479Q96M42 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00479Q96M42 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00479Q96M42 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00479Q96M42 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00479Q96M42 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC00479Q96M42 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00479Q96M42 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC00479Q96M42 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC00479Q96M42 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00479Q96M42 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00479Q96M42 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00479Q96M42 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00479Q96M42 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00479Q96M42 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00479Q96M42 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00479Q96M42 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00479Q96M42 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00479Q96M42 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00479Q96M42 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LINC00479Q96M42 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00479Q96M42 HLA-V-202ENST00000446817 847 ntBASIC17.84■□□□□ 0.45
LINC00479Q96M42 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LINC00479Q96M42 LINC01971-201ENST00000617888 1048 ntBASIC17.84■□□□□ 0.45
LINC00479Q96M42 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LINC00479Q96M42 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC00479Q96M42 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00479Q96M42 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.84■□□□□ 0.45
LINC00479Q96M42 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LINC00479Q96M42 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC00479Q96M42 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00479Q96M42 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00479Q96M42 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00479Q96M42 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.83■□□□□ 0.45
LINC00479Q96M42 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00479Q96M42 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LINC00479Q96M42 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00479Q96M42 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00479Q96M42 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00479Q96M42 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.83■□□□□ 0.44
LINC00479Q96M42 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LINC00479Q96M42 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00479Q96M42 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00479Q96M42 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00479Q96M42 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC00479Q96M42 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00479Q96M42 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC00479Q96M42 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00479Q96M42 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00479Q96M42 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00479Q96M42 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00479Q96M42 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00479Q96M42 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00479Q96M42 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00479Q96M42 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.81■□□□□ 0.44
LINC00479Q96M42 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00479Q96M42 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.81■□□□□ 0.44
LINC00479Q96M42 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00479Q96M42 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00479Q96M42 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00479Q96M42 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.8■□□□□ 0.44
LINC00479Q96M42 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC00479Q96M42 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00479Q96M42 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.8■□□□□ 0.44
LINC00479Q96M42 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LINC00479Q96M42 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.8■□□□□ 0.44
LINC00479Q96M42 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00479Q96M42 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00479Q96M42 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00479Q96M42 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LINC00479Q96M42 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00479Q96M42 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LINC00479Q96M42 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00479Q96M42 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00479Q96M42 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00479Q96M42 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LINC00479Q96M42 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00479Q96M42 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00479Q96M42 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00479Q96M42 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LINC00479Q96M42 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00479Q96M42 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00479Q96M42 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00479Q96M42 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC00479Q96M42 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00479Q96M42 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00479Q96M42 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms