Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE4Q96A23 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.05■□□□□ 0.96
CPNE4Q96A23 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.04■□□□□ 0.96
CPNE4Q96A23 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CPNE4Q96A23 AC120024.1-201ENST00000562672 995 ntBASIC21.04■□□□□ 0.96
CPNE4Q96A23 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.04■□□□□ 0.96
CPNE4Q96A23 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.04■□□□□ 0.96
CPNE4Q96A23 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CPNE4Q96A23 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE4Q96A23 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPNE4Q96A23 SLC6A10P-202ENST00000431994 2058 ntBASIC21.03■□□□□ 0.96
CPNE4Q96A23 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.03■□□□□ 0.96
CPNE4Q96A23 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE4Q96A23 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPNE4Q96A23 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE4Q96A23 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE4Q96A23 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.96
CPNE4Q96A23 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE4Q96A23 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE4Q96A23 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CPNE4Q96A23 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CPNE4Q96A23 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE4Q96A23 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE4Q96A23 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CPNE4Q96A23 AL451085.2-201ENST00000605085 799 ntBASIC21.01■□□□□ 0.95
CPNE4Q96A23 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE4Q96A23 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE4Q96A23 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21■□□□□ 0.95
CPNE4Q96A23 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE4Q96A23 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21■□□□□ 0.95
CPNE4Q96A23 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPNE4Q96A23 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPNE4Q96A23 AC090877.2-201ENST00000558441 1738 ntBASIC21■□□□□ 0.95
CPNE4Q96A23 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21■□□□□ 0.95
CPNE4Q96A23 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21■□□□□ 0.95
CPNE4Q96A23 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE4Q96A23 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.99■□□□□ 0.95
CPNE4Q96A23 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE4Q96A23 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CPNE4Q96A23 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE4Q96A23 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE4Q96A23 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE4Q96A23 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE4Q96A23 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE4Q96A23 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE4Q96A23 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.98■□□□□ 0.95
CPNE4Q96A23 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE4Q96A23 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.98■□□□□ 0.95
CPNE4Q96A23 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE4Q96A23 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CPNE4Q96A23 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE4Q96A23 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE4Q96A23 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE4Q96A23 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE4Q96A23 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE4Q96A23 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.97■□□□□ 0.95
CPNE4Q96A23 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CPNE4Q96A23 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE4Q96A23 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE4Q96A23 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE4Q96A23 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.96■□□□□ 0.95
CPNE4Q96A23 AC009299.2-201ENST00000482477 511 ntBASIC20.96■□□□□ 0.95
CPNE4Q96A23 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE4Q96A23 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE4Q96A23 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE4Q96A23 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
CPNE4Q96A23 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CPNE4Q96A23 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE4Q96A23 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE4Q96A23 MIR4281-201ENST00000580852 62 ntBASIC20.95■□□□□ 0.94
CPNE4Q96A23 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE4Q96A23 MIR6089-201ENST00000616698 64 ntBASIC20.95■□□□□ 0.94
CPNE4Q96A23 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CPNE4Q96A23 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE4Q96A23 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE4Q96A23 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE4Q96A23 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CPNE4Q96A23 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CPNE4Q96A23 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.94■□□□□ 0.94
CPNE4Q96A23 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE4Q96A23 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE4Q96A23 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE4Q96A23 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.94■□□□□ 0.94
CPNE4Q96A23 AL035685.1-201ENST00000636663 812 ntBASIC20.94■□□□□ 0.94
CPNE4Q96A23 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE4Q96A23 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE4Q96A23 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE4Q96A23 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CPNE4Q96A23 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE4Q96A23 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.93■□□□□ 0.94
CPNE4Q96A23 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.93■□□□□ 0.94
CPNE4Q96A23 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE4Q96A23 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CPNE4Q96A23 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE4Q96A23 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE4Q96A23 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.92■□□□□ 0.94
CPNE4Q96A23 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CPNE4Q96A23 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE4Q96A23 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE4Q96A23 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms