Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.82■■■□□ 2.52
RTF1Q92541 DUSP8P4-201ENST00000399538 1761 ntBASIC30.82■■■□□ 2.52
RTF1Q92541 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
RTF1Q92541 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RTF1Q92541 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RTF1Q92541 AC091060.1-201ENST00000623524 1766 ntBASIC30.82■■■□□ 2.52
RTF1Q92541 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RTF1Q92541 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.81■■■□□ 2.52
RTF1Q92541 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.81■■■□□ 2.52
RTF1Q92541 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
RTF1Q92541 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RTF1Q92541 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
RTF1Q92541 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
RTF1Q92541 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RTF1Q92541 AC090877.2-201ENST00000558441 1738 ntBASIC30.79■■■□□ 2.52
RTF1Q92541 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.79■■■□□ 2.52
RTF1Q92541 UNC93B8-201ENST00000511903 705 ntBASIC30.79■■■□□ 2.52
RTF1Q92541 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.79■■■□□ 2.52
RTF1Q92541 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.79■■■□□ 2.52
RTF1Q92541 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RTF1Q92541 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.78■■■□□ 2.52
RTF1Q92541 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.78■■■□□ 2.52
RTF1Q92541 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.78■■■□□ 2.52
RTF1Q92541 AC092028.1-203ENST00000608262 953 ntBASIC30.78■■■□□ 2.52
RTF1Q92541 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RTF1Q92541 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
RTF1Q92541 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.77■■■□□ 2.52
RTF1Q92541 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.77■■■□□ 2.52
RTF1Q92541 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RTF1Q92541 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.77■■■□□ 2.52
RTF1Q92541 TSPY9P-201ENST00000440215 945 ntBASIC30.77■■■□□ 2.52
RTF1Q92541 TSPY11P-201ENST00000442607 1045 ntBASIC30.77■■■□□ 2.52
RTF1Q92541 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.77■■■□□ 2.52
RTF1Q92541 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.77■■■□□ 2.52
RTF1Q92541 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.76■■■□□ 2.51
RTF1Q92541 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
RTF1Q92541 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
RTF1Q92541 AC145676.1-201ENST00000514988 2004 ntBASIC30.76■■■□□ 2.51
RTF1Q92541 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.76■■■□□ 2.51
RTF1Q92541 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
RTF1Q92541 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.75■■■□□ 2.51
RTF1Q92541 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.75■■■□□ 2.51
RTF1Q92541 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.75■■■□□ 2.51
RTF1Q92541 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RTF1Q92541 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
RTF1Q92541 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RTF1Q92541 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.74■■■□□ 2.51
RTF1Q92541 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
RTF1Q92541 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RTF1Q92541 KRT16P3-201ENST00000439127 1283 ntBASIC30.73■■■□□ 2.51
RTF1Q92541 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.73■■■□□ 2.51
RTF1Q92541 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RTF1Q92541 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RTF1Q92541 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.72■■■□□ 2.51
RTF1Q92541 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RTF1Q92541 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
RTF1Q92541 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.71■■■□□ 2.51
RTF1Q92541 AF131216.4-201ENST00000638924 1588 ntBASIC30.71■■■□□ 2.51
RTF1Q92541 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.71■■■□□ 2.51
RTF1Q92541 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.71■■■□□ 2.51
RTF1Q92541 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
RTF1Q92541 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.7■■■□□ 2.51
RTF1Q92541 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.7■■■□□ 2.51
RTF1Q92541 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.7■■■□□ 2.51
RTF1Q92541 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
RTF1Q92541 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RTF1Q92541 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
RTF1Q92541 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RTF1Q92541 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.69■■■□□ 2.5
RTF1Q92541 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
RTF1Q92541 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.69■■■□□ 2.5
RTF1Q92541 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.69■■■□□ 2.5
RTF1Q92541 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RTF1Q92541 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.69■■■□□ 2.5
RTF1Q92541 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RTF1Q92541 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.69■■■□□ 2.5
RTF1Q92541 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RTF1Q92541 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RTF1Q92541 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.68■■■□□ 2.5
RTF1Q92541 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RTF1Q92541 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.68■■■□□ 2.5
RTF1Q92541 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RTF1Q92541 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
RTF1Q92541 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RTF1Q92541 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RTF1Q92541 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.66■■■□□ 2.5
RTF1Q92541 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
RTF1Q92541 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
RTF1Q92541 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.66■■■□□ 2.5
RTF1Q92541 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RTF1Q92541 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.65■■■□□ 2.5
RTF1Q92541 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
RTF1Q92541 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RTF1Q92541 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
RTF1Q92541 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RTF1Q92541 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RTF1Q92541 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.64■■■□□ 2.5
RTF1Q92541 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.63■■■□□ 2.49
RTF1Q92541 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RTF1Q92541 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms