Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DNAAF1Q8NEP3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DNAAF1Q8NEP3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.53■□□□□ 0.88
DNAAF1Q8NEP3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF1Q8NEP3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
DNAAF1Q8NEP3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF1Q8NEP3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF1Q8NEP3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF1Q8NEP3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNAAF1Q8NEP3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.52■□□□□ 0.88
DNAAF1Q8NEP3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
DNAAF1Q8NEP3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.52■□□□□ 0.87
DNAAF1Q8NEP3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
DNAAF1Q8NEP3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF1Q8NEP3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF1Q8NEP3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF1Q8NEP3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.51■□□□□ 0.87
DNAAF1Q8NEP3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.51■□□□□ 0.87
DNAAF1Q8NEP3 AC092296.2-201ENST00000589470 999 ntBASIC20.51■□□□□ 0.87
DNAAF1Q8NEP3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF1Q8NEP3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.51■□□□□ 0.87
DNAAF1Q8NEP3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNAAF1Q8NEP3 AC068473.5-201ENST00000616428 2072 ntBASIC20.5■□□□□ 0.87
DNAAF1Q8NEP3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF1Q8NEP3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.5■□□□□ 0.87
DNAAF1Q8NEP3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF1Q8NEP3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF1Q8NEP3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF1Q8NEP3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNAAF1Q8NEP3 SMPD5-203ENST00000639008 1464 ntBASIC20.5■□□□□ 0.87
DNAAF1Q8NEP3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF1Q8NEP3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF1Q8NEP3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF1Q8NEP3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.49■□□□□ 0.87
DNAAF1Q8NEP3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
DNAAF1Q8NEP3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
DNAAF1Q8NEP3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF1Q8NEP3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNAAF1Q8NEP3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DNAAF1Q8NEP3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DNAAF1Q8NEP3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.48■□□□□ 0.87
DNAAF1Q8NEP3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
DNAAF1Q8NEP3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
DNAAF1Q8NEP3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.48■□□□□ 0.87
DNAAF1Q8NEP3 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.48■□□□□ 0.87
DNAAF1Q8NEP3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DNAAF1Q8NEP3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 ECEL1P2-201ENST00000461596 1295 ntBASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DNAAF1Q8NEP3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 AC004812.2-201ENST00000611079 2094 ntBASIC20.46■□□□□ 0.87
DNAAF1Q8NEP3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.45■□□□□ 0.87
DNAAF1Q8NEP3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
DNAAF1Q8NEP3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DNAAF1Q8NEP3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DNAAF1Q8NEP3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
DNAAF1Q8NEP3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DNAAF1Q8NEP3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.45■□□□□ 0.86
DNAAF1Q8NEP3 AC079834.2-201ENST00000609776 1949 ntBASIC20.45■□□□□ 0.86
DNAAF1Q8NEP3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
DNAAF1Q8NEP3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
DNAAF1Q8NEP3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
DNAAF1Q8NEP3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.44■□□□□ 0.86
DNAAF1Q8NEP3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.43■□□□□ 0.86
DNAAF1Q8NEP3 AC141586.4-201ENST00000624558 1573 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms