Protein–RNA interactions for Protein: Q8N8D7

NKAIN3, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3Q8N8D7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKAIN3Q8N8D7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKAIN3Q8N8D7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NKAIN3Q8N8D7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.24■□□□□ 0.83
NKAIN3Q8N8D7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKAIN3Q8N8D7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKAIN3Q8N8D7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.24■□□□□ 0.83
NKAIN3Q8N8D7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.24■□□□□ 0.83
NKAIN3Q8N8D7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKAIN3Q8N8D7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 AC060814.1-201ENST00000554326 538 ntBASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 SMPD5-203ENST00000639008 1464 ntBASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 DUSP8P5-201ENST00000422884 1815 ntBASIC20.23■□□□□ 0.83
NKAIN3Q8N8D7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.22■□□□□ 0.83
NKAIN3Q8N8D7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NKAIN3Q8N8D7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NKAIN3Q8N8D7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NKAIN3Q8N8D7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NKAIN3Q8N8D7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
NKAIN3Q8N8D7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NKAIN3Q8N8D7 AC133561.1-201ENST00000568600 2415 ntBASIC20.22■□□□□ 0.83
NKAIN3Q8N8D7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NKAIN3Q8N8D7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NKAIN3Q8N8D7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKAIN3Q8N8D7 AC016575.1-201ENST00000607026 382 ntBASIC20.21■□□□□ 0.83
NKAIN3Q8N8D7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKAIN3Q8N8D7 AC068473.5-201ENST00000616428 2072 ntBASIC20.2■□□□□ 0.82
NKAIN3Q8N8D7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKAIN3Q8N8D7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NKAIN3Q8N8D7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NKAIN3Q8N8D7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.2■□□□□ 0.82
NKAIN3Q8N8D7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.2■□□□□ 0.82
NKAIN3Q8N8D7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NKAIN3Q8N8D7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NKAIN3Q8N8D7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKAIN3Q8N8D7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKAIN3Q8N8D7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.19■□□□□ 0.82
NKAIN3Q8N8D7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.19■□□□□ 0.82
NKAIN3Q8N8D7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKAIN3Q8N8D7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.19■□□□□ 0.82
NKAIN3Q8N8D7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.19■□□□□ 0.82
NKAIN3Q8N8D7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKAIN3Q8N8D7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKAIN3Q8N8D7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NKAIN3Q8N8D7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NKAIN3Q8N8D7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
NKAIN3Q8N8D7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NKAIN3Q8N8D7 ABHD17AP4-201ENST00000411545 909 ntBASIC20.18■□□□□ 0.82
NKAIN3Q8N8D7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.18■□□□□ 0.82
NKAIN3Q8N8D7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NKAIN3Q8N8D7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NKAIN3Q8N8D7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NKAIN3Q8N8D7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NKAIN3Q8N8D7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NKAIN3Q8N8D7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NKAIN3Q8N8D7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.17■□□□□ 0.82
NKAIN3Q8N8D7 KRT18P10-201ENST00000388836 1287 ntBASIC20.16■□□□□ 0.82
NKAIN3Q8N8D7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NKAIN3Q8N8D7 AC092296.2-201ENST00000589470 999 ntBASIC20.16■□□□□ 0.82
NKAIN3Q8N8D7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NKAIN3Q8N8D7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 RP9P-202ENST00000450133 1212 ntBASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 HLA-L-211ENST00000482052 1765 ntBASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 ABCB10P4-201ENST00000566803 2184 ntBASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKAIN3Q8N8D7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKAIN3Q8N8D7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NKAIN3Q8N8D7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NKAIN3Q8N8D7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms