Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
SYNPOQ8N3V7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.01■■□□□ 1.43
SYNPOQ8N3V7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.01■■□□□ 1.43
SYNPOQ8N3V7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SYNPOQ8N3V7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SYNPOQ8N3V7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SYNPOQ8N3V7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.01■■□□□ 1.43
SYNPOQ8N3V7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SYNPOQ8N3V7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
SYNPOQ8N3V7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24■■□□□ 1.43
SYNPOQ8N3V7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24■■□□□ 1.43
SYNPOQ8N3V7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
SYNPOQ8N3V7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SYNPOQ8N3V7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SYNPOQ8N3V7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SYNPOQ8N3V7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SYNPOQ8N3V7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.99■■□□□ 1.43
SYNPOQ8N3V7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SYNPOQ8N3V7 AF131216.4-201ENST00000638924 1588 ntBASIC23.99■■□□□ 1.43
SYNPOQ8N3V7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SYNPOQ8N3V7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.97■■□□□ 1.43
SYNPOQ8N3V7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SYNPOQ8N3V7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
SYNPOQ8N3V7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SYNPOQ8N3V7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SYNPOQ8N3V7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.96■■□□□ 1.43
SYNPOQ8N3V7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SYNPOQ8N3V7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SYNPOQ8N3V7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.95■■□□□ 1.42
SYNPOQ8N3V7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SYNPOQ8N3V7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SYNPOQ8N3V7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SYNPOQ8N3V7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SYNPOQ8N3V7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SYNPOQ8N3V7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SYNPOQ8N3V7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SYNPOQ8N3V7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SYNPOQ8N3V7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SYNPOQ8N3V7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SYNPOQ8N3V7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SYNPOQ8N3V7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.94■■□□□ 1.42
SYNPOQ8N3V7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SYNPOQ8N3V7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.94■■□□□ 1.42
SYNPOQ8N3V7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SYNPOQ8N3V7 MIR6722-201ENST00000617286 78 ntBASIC23.93■■□□□ 1.42
SYNPOQ8N3V7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.93■■□□□ 1.42
SYNPOQ8N3V7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SYNPOQ8N3V7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SYNPOQ8N3V7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.92■■□□□ 1.42
SYNPOQ8N3V7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.92■■□□□ 1.42
SYNPOQ8N3V7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.92■■□□□ 1.42
SYNPOQ8N3V7 AC106739.1-201ENST00000617035 715 ntBASIC23.92■■□□□ 1.42
SYNPOQ8N3V7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.92■■□□□ 1.42
SYNPOQ8N3V7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SYNPOQ8N3V7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SYNPOQ8N3V7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SYNPOQ8N3V7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SYNPOQ8N3V7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SYNPOQ8N3V7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SYNPOQ8N3V7 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.9■■□□□ 1.42
SYNPOQ8N3V7 FOXO3B-201ENST00000395675 1928 ntBASIC23.9■■□□□ 1.42
SYNPOQ8N3V7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.9■■□□□ 1.42
SYNPOQ8N3V7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SYNPOQ8N3V7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.89■■□□□ 1.41
SYNPOQ8N3V7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
SYNPOQ8N3V7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.88■■□□□ 1.41
SYNPOQ8N3V7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.88■■□□□ 1.41
SYNPOQ8N3V7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SYNPOQ8N3V7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SYNPOQ8N3V7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.88■■□□□ 1.41
SYNPOQ8N3V7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.88■■□□□ 1.41
SYNPOQ8N3V7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SYNPOQ8N3V7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SYNPOQ8N3V7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SYNPOQ8N3V7 PBX2P1-201ENST00000493219 1291 ntBASIC23.87■■□□□ 1.41
SYNPOQ8N3V7 SNX5-217ENST00000606557 1087 ntBASIC23.87■■□□□ 1.41
SYNPOQ8N3V7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.87■■□□□ 1.41
SYNPOQ8N3V7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SYNPOQ8N3V7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SYNPOQ8N3V7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SYNPOQ8N3V7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms