Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SYCE1Q8N0S2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
SYCE1Q8N0S2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SYCE1Q8N0S2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
SYCE1Q8N0S2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SYCE1Q8N0S2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SYCE1Q8N0S2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SYCE1Q8N0S2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SYCE1Q8N0S2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SYCE1Q8N0S2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
SYCE1Q8N0S2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SYCE1Q8N0S2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.76■■□□□ 1.55
SYCE1Q8N0S2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.76■■□□□ 1.55
SYCE1Q8N0S2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.76■■□□□ 1.55
SYCE1Q8N0S2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SYCE1Q8N0S2 AC004812.2-201ENST00000611079 2094 ntBASIC24.76■■□□□ 1.55
SYCE1Q8N0S2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.75■■□□□ 1.55
SYCE1Q8N0S2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.75■■□□□ 1.55
SYCE1Q8N0S2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.75■■□□□ 1.55
SYCE1Q8N0S2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.75■■□□□ 1.55
SYCE1Q8N0S2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.75■■□□□ 1.55
SYCE1Q8N0S2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SYCE1Q8N0S2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SYCE1Q8N0S2 AC093536.1-201ENST00000569153 554 ntBASIC24.74■■□□□ 1.55
SYCE1Q8N0S2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SYCE1Q8N0S2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
SYCE1Q8N0S2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SYCE1Q8N0S2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SYCE1Q8N0S2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
SYCE1Q8N0S2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
SYCE1Q8N0S2 KRT18P10-201ENST00000388836 1287 ntBASIC24.73■■□□□ 1.55
SYCE1Q8N0S2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
SYCE1Q8N0S2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.73■■□□□ 1.55
SYCE1Q8N0S2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.73■■□□□ 1.55
SYCE1Q8N0S2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SYCE1Q8N0S2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SYCE1Q8N0S2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.72■■□□□ 1.55
SYCE1Q8N0S2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.72■■□□□ 1.55
SYCE1Q8N0S2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SYCE1Q8N0S2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SYCE1Q8N0S2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
SYCE1Q8N0S2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SYCE1Q8N0S2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SYCE1Q8N0S2 MIR639-201ENST00000384974 98 ntBASIC24.71■■□□□ 1.55
SYCE1Q8N0S2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.71■■□□□ 1.55
SYCE1Q8N0S2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SYCE1Q8N0S2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.7■■□□□ 1.54
SYCE1Q8N0S2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.7■■□□□ 1.54
SYCE1Q8N0S2 AC022413.1-201ENST00000624602 984 ntBASIC24.7■■□□□ 1.54
SYCE1Q8N0S2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.7■■□□□ 1.54
SYCE1Q8N0S2 AC012676.1-201ENST00000574705 1949 ntBASIC24.7■■□□□ 1.54
SYCE1Q8N0S2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 MIR7108-201ENST00000614319 87 ntBASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
SYCE1Q8N0S2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SYCE1Q8N0S2 HLA-L-211ENST00000482052 1765 ntBASIC24.68■■□□□ 1.54
SYCE1Q8N0S2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SYCE1Q8N0S2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SYCE1Q8N0S2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 AC007029.1-201ENST00000604183 313 ntBASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.67■■□□□ 1.54
SYCE1Q8N0S2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.66■■□□□ 1.54
SYCE1Q8N0S2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SYCE1Q8N0S2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SYCE1Q8N0S2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SYCE1Q8N0S2 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.66■■□□□ 1.54
SYCE1Q8N0S2 FOXO3B-201ENST00000395675 1928 ntBASIC24.66■■□□□ 1.54
SYCE1Q8N0S2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SYCE1Q8N0S2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SYCE1Q8N0S2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SYCE1Q8N0S2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SYCE1Q8N0S2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SYCE1Q8N0S2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SYCE1Q8N0S2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SYCE1Q8N0S2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
SYCE1Q8N0S2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
SYCE1Q8N0S2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
SYCE1Q8N0S2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SYCE1Q8N0S2 DUSP8P5-201ENST00000422884 1815 ntBASIC24.64■■□□□ 1.54
SYCE1Q8N0S2 ABCB10P4-201ENST00000566803 2184 ntBASIC24.64■■□□□ 1.53
SYCE1Q8N0S2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
SYCE1Q8N0S2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SYCE1Q8N0S2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms