Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.71■■□□□ 1.39
SRRM1Q8IYB3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SRRM1Q8IYB3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SRRM1Q8IYB3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SRRM1Q8IYB3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SRRM1Q8IYB3 ABCB10P4-201ENST00000566803 2184 ntBASIC23.69■■□□□ 1.38
SRRM1Q8IYB3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.69■■□□□ 1.38
SRRM1Q8IYB3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SRRM1Q8IYB3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
SRRM1Q8IYB3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SRRM1Q8IYB3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SRRM1Q8IYB3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SRRM1Q8IYB3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.68■■□□□ 1.38
SRRM1Q8IYB3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SRRM1Q8IYB3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SRRM1Q8IYB3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SRRM1Q8IYB3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.67■■□□□ 1.38
SRRM1Q8IYB3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SRRM1Q8IYB3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.67■■□□□ 1.38
SRRM1Q8IYB3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SRRM1Q8IYB3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SRRM1Q8IYB3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.67■■□□□ 1.38
SRRM1Q8IYB3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SRRM1Q8IYB3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SRRM1Q8IYB3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.66■■□□□ 1.38
SRRM1Q8IYB3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SRRM1Q8IYB3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SRRM1Q8IYB3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.65■■□□□ 1.38
SRRM1Q8IYB3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SRRM1Q8IYB3 DUX4L11-201ENST00000611504 1267 ntBASIC23.65■■□□□ 1.38
SRRM1Q8IYB3 DUX4L12-201ENST00000614593 1267 ntBASIC23.65■■□□□ 1.38
SRRM1Q8IYB3 DUX4L14-201ENST00000621227 1267 ntBASIC23.65■■□□□ 1.38
SRRM1Q8IYB3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.65■■□□□ 1.38
SRRM1Q8IYB3 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.64■■□□□ 1.37
SRRM1Q8IYB3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SRRM1Q8IYB3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SRRM1Q8IYB3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SRRM1Q8IYB3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SRRM1Q8IYB3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SRRM1Q8IYB3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SRRM1Q8IYB3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SRRM1Q8IYB3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.63■■□□□ 1.37
SRRM1Q8IYB3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SRRM1Q8IYB3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SRRM1Q8IYB3 AC079834.2-201ENST00000609776 1949 ntBASIC23.63■■□□□ 1.37
SRRM1Q8IYB3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SRRM1Q8IYB3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SRRM1Q8IYB3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SRRM1Q8IYB3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SRRM1Q8IYB3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SRRM1Q8IYB3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.61■■□□□ 1.37
SRRM1Q8IYB3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.61■■□□□ 1.37
SRRM1Q8IYB3 C9orf163-202ENST00000624034 2573 ntBASIC23.61■■□□□ 1.37
SRRM1Q8IYB3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.6■■□□□ 1.37
SRRM1Q8IYB3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SRRM1Q8IYB3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.6■■□□□ 1.37
SRRM1Q8IYB3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SRRM1Q8IYB3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SRRM1Q8IYB3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SRRM1Q8IYB3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SRRM1Q8IYB3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SRRM1Q8IYB3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.59■■□□□ 1.37
SRRM1Q8IYB3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.59■■□□□ 1.37
SRRM1Q8IYB3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SRRM1Q8IYB3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SRRM1Q8IYB3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SRRM1Q8IYB3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.58■■□□□ 1.37
SRRM1Q8IYB3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SRRM1Q8IYB3 AC126177.7-201ENST00000547904 679 ntBASIC23.58■■□□□ 1.37
SRRM1Q8IYB3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.58■■□□□ 1.37
SRRM1Q8IYB3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SRRM1Q8IYB3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
SRRM1Q8IYB3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 MIR6089-201ENST00000616698 64 ntBASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SRRM1Q8IYB3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.56■■□□□ 1.36
SRRM1Q8IYB3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SRRM1Q8IYB3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SRRM1Q8IYB3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms