Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.29■■□□□ 1
RP1L1Q8IWN7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.29■■□□□ 1
RP1L1Q8IWN7 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.29■■□□□ 1
RP1L1Q8IWN7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.29■■□□□ 1
RP1L1Q8IWN7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.29■■□□□ 1
RP1L1Q8IWN7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RP1L1Q8IWN7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RP1L1Q8IWN7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RP1L1Q8IWN7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.28■■□□□ 1
RP1L1Q8IWN7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.28■■□□□ 1
RP1L1Q8IWN7 AL162430.1-201ENST00000480705 870 ntBASIC21.28■■□□□ 1
RP1L1Q8IWN7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RP1L1Q8IWN7 AL355001.2-201ENST00000620617 1191 ntBASIC21.28■■□□□ 1
RP1L1Q8IWN7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RP1L1Q8IWN7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.28■■□□□ 1
RP1L1Q8IWN7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.28■■□□□ 1
RP1L1Q8IWN7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.27■■□□□ 1
RP1L1Q8IWN7 AF131216.4-201ENST00000638924 1588 ntBASIC21.27■■□□□ 1
RP1L1Q8IWN7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RP1L1Q8IWN7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RP1L1Q8IWN7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RP1L1Q8IWN7 AC024257.2-201ENST00000549699 147 ntBASIC21.27■■□□□ 1
RP1L1Q8IWN7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RP1L1Q8IWN7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
RP1L1Q8IWN7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RP1L1Q8IWN7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RP1L1Q8IWN7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RP1L1Q8IWN7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RP1L1Q8IWN7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RP1L1Q8IWN7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RP1L1Q8IWN7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.25■□□□□ 0.99
RP1L1Q8IWN7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.24■□□□□ 0.99
RP1L1Q8IWN7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RP1L1Q8IWN7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RP1L1Q8IWN7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RP1L1Q8IWN7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RP1L1Q8IWN7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RP1L1Q8IWN7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.24■□□□□ 0.99
RP1L1Q8IWN7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RP1L1Q8IWN7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RP1L1Q8IWN7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
RP1L1Q8IWN7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.23■□□□□ 0.99
RP1L1Q8IWN7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RP1L1Q8IWN7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RP1L1Q8IWN7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.23■□□□□ 0.99
RP1L1Q8IWN7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.23■□□□□ 0.99
RP1L1Q8IWN7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RP1L1Q8IWN7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RP1L1Q8IWN7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RP1L1Q8IWN7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RP1L1Q8IWN7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RP1L1Q8IWN7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RP1L1Q8IWN7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.21■□□□□ 0.99
RP1L1Q8IWN7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.21■□□□□ 0.99
RP1L1Q8IWN7 AC097381.1-201ENST00000429019 1296 ntBASIC21.21■□□□□ 0.99
RP1L1Q8IWN7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.21■□□□□ 0.99
RP1L1Q8IWN7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RP1L1Q8IWN7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 AC105265.2-201ENST00000467189 838 ntBASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RP1L1Q8IWN7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RP1L1Q8IWN7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RP1L1Q8IWN7 MIR6821-201ENST00000617625 74 ntBASIC21.19■□□□□ 0.98
RP1L1Q8IWN7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RP1L1Q8IWN7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RP1L1Q8IWN7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.19■□□□□ 0.98
RP1L1Q8IWN7 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.19■□□□□ 0.98
RP1L1Q8IWN7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RP1L1Q8IWN7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RP1L1Q8IWN7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
RP1L1Q8IWN7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.18■□□□□ 0.98
RP1L1Q8IWN7 RASA4CP-201ENST00000424092 1398 ntBASIC21.18■□□□□ 0.98
RP1L1Q8IWN7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.18■□□□□ 0.98
RP1L1Q8IWN7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.18■□□□□ 0.98
RP1L1Q8IWN7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RP1L1Q8IWN7 UNC93B3-201ENST00000308076 687 ntBASIC21.17■□□□□ 0.98
RP1L1Q8IWN7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RP1L1Q8IWN7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.17■□□□□ 0.98
RP1L1Q8IWN7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms