Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM50Q86XT4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.34■■□□□ 1.81
TRIM50Q86XT4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
TRIM50Q86XT4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.33■■□□□ 1.81
TRIM50Q86XT4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.33■■□□□ 1.81
TRIM50Q86XT4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM50Q86XT4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM50Q86XT4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
TRIM50Q86XT4 AC092803.2-201ENST00000564287 1899 ntBASIC26.33■■□□□ 1.81
TRIM50Q86XT4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM50Q86XT4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.32■■□□□ 1.8
TRIM50Q86XT4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.32■■□□□ 1.8
TRIM50Q86XT4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.32■■□□□ 1.8
TRIM50Q86XT4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
TRIM50Q86XT4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
TRIM50Q86XT4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM50Q86XT4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM50Q86XT4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.31■■□□□ 1.8
TRIM50Q86XT4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM50Q86XT4 AF131216.4-201ENST00000638924 1588 ntBASIC26.31■■□□□ 1.8
TRIM50Q86XT4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.31■■□□□ 1.8
TRIM50Q86XT4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM50Q86XT4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM50Q86XT4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.31■■□□□ 1.8
TRIM50Q86XT4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM50Q86XT4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM50Q86XT4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TRIM50Q86XT4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM50Q86XT4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.3■■□□□ 1.8
TRIM50Q86XT4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM50Q86XT4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM50Q86XT4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM50Q86XT4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM50Q86XT4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM50Q86XT4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TRIM50Q86XT4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM50Q86XT4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
TRIM50Q86XT4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.28■■□□□ 1.8
TRIM50Q86XT4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM50Q86XT4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM50Q86XT4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM50Q86XT4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.27■■□□□ 1.8
TRIM50Q86XT4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.27■■□□□ 1.8
TRIM50Q86XT4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM50Q86XT4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM50Q86XT4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM50Q86XT4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
TRIM50Q86XT4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM50Q86XT4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM50Q86XT4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM50Q86XT4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
TRIM50Q86XT4 AC008406.3-201ENST00000620001 1374 ntBASIC26.26■■□□□ 1.79
TRIM50Q86XT4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM50Q86XT4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM50Q86XT4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.25■■□□□ 1.79
TRIM50Q86XT4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM50Q86XT4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM50Q86XT4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM50Q86XT4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
TRIM50Q86XT4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.24■■□□□ 1.79
TRIM50Q86XT4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM50Q86XT4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM50Q86XT4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.23■■□□□ 1.79
TRIM50Q86XT4 AC090877.2-201ENST00000558441 1738 ntBASIC26.23■■□□□ 1.79
TRIM50Q86XT4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.23■■□□□ 1.79
TRIM50Q86XT4 AC010997.5-201ENST00000609182 354 ntBASIC26.23■■□□□ 1.79
TRIM50Q86XT4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.23■■□□□ 1.79
TRIM50Q86XT4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM50Q86XT4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.23■■□□□ 1.79
TRIM50Q86XT4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.22■■□□□ 1.79
TRIM50Q86XT4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.22■■□□□ 1.79
TRIM50Q86XT4 MTDHP2-201ENST00000601468 714 ntBASIC26.22■■□□□ 1.79
TRIM50Q86XT4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
TRIM50Q86XT4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.21■■□□□ 1.79
TRIM50Q86XT4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.21■■□□□ 1.79
TRIM50Q86XT4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.21■■□□□ 1.79
TRIM50Q86XT4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM50Q86XT4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM50Q86XT4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRIM50Q86XT4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM50Q86XT4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM50Q86XT4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM50Q86XT4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.2■■□□□ 1.78
TRIM50Q86XT4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.2■■□□□ 1.78
TRIM50Q86XT4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.2■■□□□ 1.78
TRIM50Q86XT4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.2■■□□□ 1.78
TRIM50Q86XT4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.2■■□□□ 1.78
TRIM50Q86XT4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.2■■□□□ 1.78
TRIM50Q86XT4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.19■■□□□ 1.78
TRIM50Q86XT4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.19■■□□□ 1.78
TRIM50Q86XT4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM50Q86XT4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.19■■□□□ 1.78
TRIM50Q86XT4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
TRIM50Q86XT4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
TRIM50Q86XT4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.19■■□□□ 1.78
TRIM50Q86XT4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM50Q86XT4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.18■■□□□ 1.78
TRIM50Q86XT4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.18■■□□□ 1.78
TRIM50Q86XT4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.18■■□□□ 1.78
TRIM50Q86XT4 AL117332.1-201ENST00000622628 974 ntBASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms