Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 HARS-202ENST00000415192 1401 ntTSL 2 BASIC30.47■■■□□ 2.477e-7■■■■□ 20.3
PABPN1Q86U42 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC28.63■■■□□ 2.177e-7■■■■□ 20.3
PABPN1Q86U42 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.877e-7■■■■□ 20.3
PABPN1Q86U42 HARS-208ENST00000504366 3494 ntTSL 2 BASIC14.91□□□□□ -0.027e-7■■■■□ 20.3
PABPN1Q86U42 SRRT-204ENST00000448764 1607 ntTSL 530.29■■■□□ 2.441e-6■■■■□ 20.3
PABPN1Q86U42 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.061e-6■■■■□ 20.3
PABPN1Q86U42 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.061e-6■■■■□ 20.3
PABPN1Q86U42 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.931e-6■■■■□ 20.3
PABPN1Q86U42 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.711e-6■■■■□ 20.3
PABPN1Q86U42 NASP-223ENST00000534450 632 ntTSL 212.96□□□□□ -0.333e-10■■■■□ 20.3
PABPN1Q86U42 B4GALNT4-205ENST00000534778 876 ntTSL 334.57■■■■□ 3.124e-7■■■■□ 20.3
PABPN1Q86U42 DDX56-207ENST00000448192 691 ntTSL 236.1■■■■□ 3.375e-8■■■■□ 20.2
PABPN1Q86U42 CC2D1A-204ENST00000587508 1667 ntTSL 535.84■■■■□ 3.332e-6■■■■□ 20.2
PABPN1Q86U42 CC2D1A-203ENST00000586955 2743 ntTSL 1 (best)23.58■■□□□ 1.372e-6■■■■□ 20.2
PABPN1Q86U42 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.282e-6■■■■□ 20.2
PABPN1Q86U42 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.982e-6■■■■□ 20.2
PABPN1Q86U42 CENPT-228ENST00000568564 537 ntTSL 433.58■■■□□ 2.973e-6■■■■□ 20.2
PABPN1Q86U42 CENPT-203ENST00000561593 673 ntTSL 430.54■■■□□ 2.483e-6■■■■□ 20.2
PABPN1Q86U42 CENPT-216ENST00000565114 633 ntTSL 430.41■■■□□ 2.463e-6■■■■□ 20.2
PABPN1Q86U42 QARS-231ENST00000634602 544 ntTSL 429.16■■■□□ 2.269e-8■■■■□ 20.2
PABPN1Q86U42 QARS-217ENST00000482261 1149 ntTSL 525.86■■□□□ 1.739e-8■■■■□ 20.2
PABPN1Q86U42 QARS-221ENST00000494767 1023 ntTSL 525.86■■□□□ 1.739e-8■■■■□ 20.2
PABPN1Q86U42 QARS-245ENST00000635541 907 ntTSL 325.77■■□□□ 1.729e-8■■■■□ 20.2
PABPN1Q86U42 SARS2-211ENST00000598831 665 ntTSL 5 BASIC24.81■■□□□ 1.569e-7■■■■□ 20.2
PABPN1Q86U42 QARS-242ENST00000635443 1053 ntTSL 524.32■■□□□ 1.489e-8■■■■□ 20.2
PABPN1Q86U42 QARS-241ENST00000635375 947 ntTSL 324.16■■□□□ 1.469e-8■■■■□ 20.2
PABPN1Q86U42 QARS-206ENST00000452739 1044 ntTSL 522.72■■□□□ 1.239e-8■■■■□ 20.2
PABPN1Q86U42 QARS-213ENST00000470619 876 ntTSL 422.43■■□□□ 1.189e-8■■■■□ 20.2
PABPN1Q86U42 QARS-244ENST00000635501 1290 ntTSL 222.02■■□□□ 1.129e-8■■■■□ 20.2
PABPN1Q86U42 QARS-246ENST00000635622 701 ntTSL 321.56■■□□□ 1.049e-8■■■■□ 20.2
PABPN1Q86U42 QARS-234ENST00000634802 599 ntTSL 421.21■□□□□ 0.999e-8■■■■□ 20.2
PABPN1Q86U42 QARS-230ENST00000634527 732 ntTSL 520.89■□□□□ 0.939e-8■■■■□ 20.2
PABPN1Q86U42 QARS-240ENST00000635292 574 ntTSL 417.6■□□□□ 0.419e-8■■■■□ 20.2
PABPN1Q86U42 PRKRIP1-203ENST00000468316 2045 ntTSL 1 (best)27.29■■□□□ 1.961e-6■■■■□ 20.2
PABPN1Q86U42 CFB-284ENST00000498317 589 ntTSL 217.66■□□□□ 0.423e-7■■■■□ 20.2
PABPN1Q86U42 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC30.41■■■□□ 2.463e-8■■■■□ 20.2
PABPN1Q86U42 SEMA3B-208ENST00000456210 2065 ntTSL 230.38■■■□□ 2.453e-8■■■■□ 20.2
PABPN1Q86U42 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)25.42■■□□□ 1.663e-8■■■■□ 20.2
PABPN1Q86U42 SEMA3B-203ENST00000419007 3283 ntTSL 223.92■■□□□ 1.423e-8■■■■□ 20.2
PABPN1Q86U42 CFB-280ENST00000482312 764 ntTSL 215.66■□□□□ 0.12e-7■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC51.36■■■■■ 5.817e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-217ENST00000540382 1677 ntTSL 547.42■■■■■ 5.187e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-216ENST00000539770 1295 ntTSL 1 (best)44.5■■■■■ 4.717e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC44.02■■■■■ 4.647e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-218ENST00000540708 1782 ntTSL 243.35■■■■■ 4.537e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC42.44■■■■■ 4.387e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC42.04■■■■■ 4.327e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-214ENST00000536502 1273 ntTSL 242.01■■■■■ 4.327e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-213ENST00000536073 562 ntTSL 240.04■■■■■ 47e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC37.8■■■■□ 3.647e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-203ENST00000392433 1370 ntTSL 235.27■■■■□ 3.247e-8■■■■□ 20.2
PABPN1Q86U42 ARL6IP4-215ENST00000539576 1684 ntTSL 533.84■■■■□ 3.017e-8■■■■□ 20.2
PABPN1Q86U42 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC28.09■■■□□ 2.097e-8■■■■□ 20.2
PABPN1Q86U42 RHOT2-213ENST00000565004 1014 ntTSL 533.08■■■□□ 2.891e-7■■■■□ 20.1
PABPN1Q86U42 NOP2-213ENST00000542015 1002 ntTSL 327.65■■■□□ 2.022e-6■■■■□ 20.1
PABPN1Q86U42 EIF3B-210ENST00000468611 1868 ntTSL 228.03■■■□□ 2.087e-7■■■■□ 20.1
PABPN1Q86U42 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.593e-6■■■■□ 20.1
PABPN1Q86U42 MYO15B-235ENST00000621743 8646 ntTSL 523.37■■□□□ 1.333e-6■■■■□ 20.1
PABPN1Q86U42 MYO15B-237ENST00000642007 4893 ntBASIC22.41■■□□□ 1.183e-6■■■■□ 20.1
PABPN1Q86U42 MYO15B-216ENST00000580262 707 ntTSL 321.68■■□□□ 1.063e-6■■■■□ 20.1
PABPN1Q86U42 MYO15B-233ENST00000612587 4189 ntTSL 519.48■□□□□ 0.713e-6■■■■□ 20.1
PABPN1Q86U42 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC18.8■□□□□ 0.63e-6■■■■□ 20.1
PABPN1Q86U42 COL9A3-210ENST00000472880 959 ntTSL 341.01■■■■■ 4.161e-12■■■■□ 20.1
PABPN1Q86U42 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC40.53■■■■■ 4.082e-10■■■■□ 20.1
PABPN1Q86U42 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC40.53■■■■■ 4.082e-10■■■■□ 20.1
PABPN1Q86U42 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.982e-10■■■■□ 20.1
PABPN1Q86U42 CLDND2-202ENST00000593841 417 ntTSL 539.2■■■■□ 3.872e-10■■■■□ 20.1
PABPN1Q86U42 NADSYN1-218ENST00000530831 2861 ntTSL 214.35□□□□□ -0.111e-7■■■■□ 20.1
PABPN1Q86U42 PLA2G4B-203ENST00000461382 1530 ntTSL 236.25■■■■□ 3.396e-7■■■■□ 20.1
PABPN1Q86U42 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.213e-6■■■■□ 20
PABPN1Q86U42 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.267e-7■■■■□ 20
PABPN1Q86U42 INPPL1-203ENST00000535985 353 ntTSL 224.07■■□□□ 1.447e-7■■■■□ 20
PABPN1Q86U42 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC22.84■■□□□ 1.257e-7■■■■□ 20
PABPN1Q86U42 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC21.88■■□□□ 1.097e-7■■■■□ 20
PABPN1Q86U42 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC42.4■■■■■ 4.382e-6■■■■□ 20
PABPN1Q86U42 EXOC3L4-206ENST00000560304 657 ntTSL 340.7■■■■■ 4.117e-7■■■■□ 20
PABPN1Q86U42 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC39.13■■■■□ 3.854e-10■■■■□ 20
PABPN1Q86U42 ANKS3-219ENST00000591185 2187 ntTSL 237.83■■■■□ 3.652e-6■■■■□ 20
PABPN1Q86U42 EXOC3L4-204ENST00000559693 813 ntTSL 333.52■■■□□ 2.967e-7■■■■□ 20
PABPN1Q86U42 ANKS3-212ENST00000589035 2210 ntTSL 232.83■■■□□ 2.852e-6■■■■□ 20
PABPN1Q86U42 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC29.92■■■□□ 2.382e-6■■■■□ 20
PABPN1Q86U42 ANKS3-215ENST00000590193 2291 ntTSL 529.92■■■□□ 2.382e-6■■■■□ 20
PABPN1Q86U42 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.372e-6■■■■□ 20
PABPN1Q86U42 ANKS3-223ENST00000592077 2302 ntTSL 1 (best)29.62■■■□□ 2.332e-6■■■■□ 20
PABPN1Q86U42 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.212e-6■■■■□ 20
PABPN1Q86U42 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.24e-10■■■■□ 20
PABPN1Q86U42 RNF40-203ENST00000493683 5371 ntTSL 227.6■■■□□ 2.014e-10■■■■□ 20
PABPN1Q86U42 RNF40-212ENST00000602784 991 ntTSL 326.82■■□□□ 1.884e-10■■■■□ 20
PABPN1Q86U42 ANKS3-218ENST00000590803 2821 ntTSL 225.42■■□□□ 1.662e-6■■■■□ 20
PABPN1Q86U42 ANKS3-221ENST00000591653 3098 ntTSL 1 (best)23.61■■□□□ 1.372e-6■■■■□ 20
PABPN1Q86U42 RNF40-204ENST00000563683 4063 ntTSL 5 BASIC15.91■□□□□ 0.144e-10■■■■□ 20
PABPN1Q86U42 RNF40-202ENST00000357890 3917 ntTSL 2 BASIC15.27■□□□□ 0.044e-10■■■■□ 20
PABPN1Q86U42 RHOT2-217ENST00000567589 550 ntTSL 341.28■■■■■ 4.25e-7■■■■□ 20
PABPN1Q86U42 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC28.14■■■□□ 2.11e-6■■■■□ 20
PABPN1Q86U42 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC49.99■■■■■ 5.597e-24■■■■□ 20
PABPN1Q86U42 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC38.46■■■■□ 3.757e-24■■■■□ 20
PABPN1Q86U42 VARS2-204ENST00000467717 863 ntTSL 332.38■■■□□ 2.775e-7■■■■□ 20
PABPN1Q86U42 VARS2-203ENST00000428017 1103 ntTSL 228.83■■■□□ 2.215e-7■■■■□ 20
PABPN1Q86U42 HEXDC-212ENST00000582429 1824 ntTSL 243■■■■■ 4.477e-7■■■■□ 20
PABPN1Q86U42 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC40.13■■■■■ 4.027e-7■■■■□ 20
Retrieved 100 of 8,254 protein–RNA pairs in 252.5 ms