Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13BQ7Z7G8 AC024257.2-201ENST00000549699 147 ntBASIC14.72□□□□□ -0.05
VPS13BQ7Z7G8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13BQ7Z7G8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.72□□□□□ -0.05
VPS13BQ7Z7G8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS13BQ7Z7G8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13BQ7Z7G8 AC097381.1-201ENST00000429019 1296 ntBASIC14.72□□□□□ -0.05
VPS13BQ7Z7G8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.72□□□□□ -0.05
VPS13BQ7Z7G8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VPS13BQ7Z7G8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.71□□□□□ -0.05
VPS13BQ7Z7G8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 AL136967.2-201ENST00000623968 743 ntBASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13BQ7Z7G8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS13BQ7Z7G8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13BQ7Z7G8 PBX2P1-201ENST00000493219 1291 ntBASIC14.68□□□□□ -0.06
VPS13BQ7Z7G8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13BQ7Z7G8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13BQ7Z7G8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 AP004609.3-201ENST00000610705 1884 ntBASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13BQ7Z7G8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 AP001330.3-201ENST00000520123 633 ntBASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13BQ7Z7G8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13BQ7Z7G8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13BQ7Z7G8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
VPS13BQ7Z7G8 MIR939-201ENST00000401314 82 ntBASIC14.65□□□□□ -0.06
VPS13BQ7Z7G8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.65□□□□□ -0.06
VPS13BQ7Z7G8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS13BQ7Z7G8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC14.65□□□□□ -0.06
VPS13BQ7Z7G8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS13BQ7Z7G8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VPS13BQ7Z7G8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 GAK-223ENST00000628912 497 ntTSL 5 BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VPS13BQ7Z7G8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms