Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CSMD2Q7Z408 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CSMD2Q7Z408 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.14■□□□□ 0.82
CSMD2Q7Z408 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.14■□□□□ 0.82
CSMD2Q7Z408 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CSMD2Q7Z408 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CSMD2Q7Z408 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.14■□□□□ 0.81
CSMD2Q7Z408 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.14■□□□□ 0.81
CSMD2Q7Z408 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSMD2Q7Z408 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CSMD2Q7Z408 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.14■□□□□ 0.81
CSMD2Q7Z408 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSMD2Q7Z408 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSMD2Q7Z408 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD2Q7Z408 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.13■□□□□ 0.81
CSMD2Q7Z408 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD2Q7Z408 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.13■□□□□ 0.81
CSMD2Q7Z408 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD2Q7Z408 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSMD2Q7Z408 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.12■□□□□ 0.81
CSMD2Q7Z408 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.12■□□□□ 0.81
CSMD2Q7Z408 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.12■□□□□ 0.81
CSMD2Q7Z408 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.12■□□□□ 0.81
CSMD2Q7Z408 SNX5-217ENST00000606557 1087 ntBASIC20.12■□□□□ 0.81
CSMD2Q7Z408 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSMD2Q7Z408 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSMD2Q7Z408 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD2Q7Z408 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD2Q7Z408 SRD5A1P1-201ENST00000442297 786 ntBASIC20.11■□□□□ 0.81
CSMD2Q7Z408 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD2Q7Z408 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CSMD2Q7Z408 KRT18P10-201ENST00000388836 1287 ntBASIC20.11■□□□□ 0.81
CSMD2Q7Z408 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD2Q7Z408 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD2Q7Z408 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD2Q7Z408 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD2Q7Z408 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.11■□□□□ 0.81
CSMD2Q7Z408 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSMD2Q7Z408 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CSMD2Q7Z408 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CSMD2Q7Z408 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.1■□□□□ 0.81
CSMD2Q7Z408 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CSMD2Q7Z408 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.1■□□□□ 0.81
CSMD2Q7Z408 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSMD2Q7Z408 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSMD2Q7Z408 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSMD2Q7Z408 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.09■□□□□ 0.81
CSMD2Q7Z408 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CSMD2Q7Z408 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.08■□□□□ 0.81
CSMD2Q7Z408 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CSMD2Q7Z408 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CSMD2Q7Z408 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.08■□□□□ 0.81
CSMD2Q7Z408 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CSMD2Q7Z408 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
CSMD2Q7Z408 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.08■□□□□ 0.8
CSMD2Q7Z408 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CSMD2Q7Z408 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.08■□□□□ 0.8
CSMD2Q7Z408 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSMD2Q7Z408 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSMD2Q7Z408 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CSMD2Q7Z408 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.07■□□□□ 0.8
CSMD2Q7Z408 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSMD2Q7Z408 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSMD2Q7Z408 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSMD2Q7Z408 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSMD2Q7Z408 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CSMD2Q7Z408 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CSMD2Q7Z408 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSMD2Q7Z408 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CSMD2Q7Z408 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CSMD2Q7Z408 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.06■□□□□ 0.8
CSMD2Q7Z408 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CSMD2Q7Z408 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CSMD2Q7Z408 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.06■□□□□ 0.8
CSMD2Q7Z408 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSMD2Q7Z408 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CSMD2Q7Z408 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSMD2Q7Z408 HLA-L-209ENST00000420110 1011 ntBASIC20.05■□□□□ 0.8
CSMD2Q7Z408 SLC47A1P1-202ENST00000449666 945 ntBASIC20.05■□□□□ 0.8
CSMD2Q7Z408 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSMD2Q7Z408 MIR4767-201ENST00000582827 78 ntBASIC20.05■□□□□ 0.8
CSMD2Q7Z408 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.05■□□□□ 0.8
CSMD2Q7Z408 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSMD2Q7Z408 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.04■□□□□ 0.8
CSMD2Q7Z408 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.04■□□□□ 0.8
CSMD2Q7Z408 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.04■□□□□ 0.8
CSMD2Q7Z408 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.04■□□□□ 0.8
CSMD2Q7Z408 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CSMD2Q7Z408 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms